Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4248 |
Symbol | |
ID | 5872052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4751739 |
End bp | 4752635 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641549379 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001670472 |
Protein GI | 167035241 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCAGA TCCACCTGAT GAAGGTGTTC GTTGCCGTCG GCGAACTGGA AAGCTTCGCC GCCGCTGCTC GCCGCCTGGA CATCTCGCCA GCCGCCGTCA CCCGCGCCGT CAGCGCTCTG GAAGACCAGC TCGGGGTCAA GCTGCTGCTG CGTACTACCC GCAGCGTGCG CCTGACCGAG GCCGGCGGGC GCTATCTGGA AGACACGCGG CATATCCTTG CCAGCATTCA CGAAGCCAAC GAGGCGGCTG CCGGTATCAA CGCCACCCCC AAGGGCGACC TGGCAGTGAC CGCGCCGATC CTGTTCGGCA AGAAGTTCGT CATGCCGTGC ATCGTCCGCT ACTTGCAGCA GTACCCGGAA GTCGATGTTT CCGCCTACTT CCTCGACCGT GTTGTAAACA TGGTCGAGGA GGGCATGGAC GTGGCCGTGC GCATCGGTCC TTTGCCCGAC TCCGGGTTGA AGGCGTTGCG GGTGGGCAGG GTGCGTCGCA TGTTGTGTGC CTCGCCCGAC TACCTGGCGC GTCATGGCGT ACCGGAGCAC CCGTCGGACC TGGCAGGGCA TGCGGTGATC GGCACCACCA ACCTTTCGCC ACGGGCCGGT TGGCGCTTTG GGGTCACCGA TGAGCCGACG CTGGTACGCA TGAAGCCGCG GCTGACGGTA ACCAGCAATG ATGGGGCAAT CGCAGCGGCC AGCGGCGGGC TGGGGATTGC CCGGCTGCTG TCGTACCAAG TGGCAGAAGA GCTGGCCAGC GGGCAACTGC AGGTGATCCT GGCCGAGTAC GAGGAGGCGC CCTGGCCCAT TCATGTGCTG CACCGCGAAA GCAAGTACGG CTCGGCCAAG GTCAGGGCCT TTATCGACAT GCTGGCGCAG GCCCTGCGAG CCCAGCAGCT CGATTGA
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Protein sequence | MDQIHLMKVF VAVGELESFA AAARRLDISP AAVTRAVSAL EDQLGVKLLL RTTRSVRLTE AGGRYLEDTR HILASIHEAN EAAAGINATP KGDLAVTAPI LFGKKFVMPC IVRYLQQYPE VDVSAYFLDR VVNMVEEGMD VAVRIGPLPD SGLKALRVGR VRRMLCASPD YLARHGVPEH PSDLAGHAVI GTTNLSPRAG WRFGVTDEPT LVRMKPRLTV TSNDGAIAAA SGGLGIARLL SYQVAEELAS GQLQVILAEY EEAPWPIHVL HRESKYGSAK VRAFIDMLAQ ALRAQQLD
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