| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4189 |
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| Symbol | |
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| ID | 5871989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4686636 |
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| End bp | 4687988 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641549316 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001670413 |
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| Protein GI | 167035182 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.121323 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCCTG ACCACCGCGC TACCGGCAAC GGCCAACTCC GCAAAACCCT GCGCCTCTGG
CACGTGATCA TCATCGGCCT GGCCTACCTG ACCCCGATGA CCGTGTTCGA CACCTTCGGC
ATCGTCAGCG GGATTACTGC CGGCCACGTA CCCAGCGCCT ACATTCTGGC ACTGGCCGGG
ATCCTGTTCA CCGCCGTGAG CTACGGCACC CTGGTCAAGC GCTTCCCGCA GTCGGGCTCG
GCCTACACCT ACACCCAAAA GGCGATCAAC CCGCACGTGG GCTTCCTGGT CGGCTGGTCG
TCGTTGCTGG ACTACCTGCT GTTGCCGATG GTCAACGCGC TGCTGGCCAA ACTGTACCTT
TCAGCGATGT TCCCGGAAGT GCCGGAGTGG ATGTGGGTAG CAGGCTTCGT CACCCTGATC
AGCCTGATCA ACATGCGCAG CGTCAACCTG GTGGCGCACT TCAACCTGCT GTTCGTGGGC
GTGCAGGTGG CGATCATTGC CGTATTCATC TACCTGTGCG TACGCGGCCT GGACCACGGT
GAAGGGCTGG GTACCGCCTG GAGCCTGATG CCGTTCGCCG ACAGCCAGAC CCAATTCAGC
GCCCTGGCCG CCGGTGCGAC CATCCTGTGC TTCTCGTTCC TGGGCTTTGA CGCGGTCACC
TGCCTGTCCG AAGAAACCCG CGACCCGGCC AAGACCATCC CCCGTGCGAT CTTCCTCACC
GCACTGATCG GCGGCGTGGT GTTCATCACC GTTTCTTACT TCATCCAGGC CTACTTCCCG
ACCATGGCTC GCTTCCACGA CCAGGAAGCG GCCCTGCCGG AAATCGCCCT GTACGTCGGC
GGCAAGCTGT TCCAGTCGAT TTTCATCGCC TGCACCGTGA TCAACACCAT CGCCTCGGGC
CTGGCCTCGC AAACCAGCGT GTCGCGCCTG CTGTACGTGA TGGGCCGCGA CAACGTCATC
CCGGCCAGCG TCTTCGCCCG CCTGCATTCA CGCTACAAGA CGCCAGTGCT GAACATTGCC
GTAGTGGGGA TCATTTCCCT GTCGGCGATC TTCTTCGACC TGGTGACCGC CACCTCGATC
ATCAACTTCG GCGCCCTGGT CGCGTTCAGC TTCGTCAACC TGTCGGTGAT CAACCACTGC
TACCTGCGCG AAGGCAACCG CAAGGGGCTG GCCAACCAGC TGAAGTACCT GGTGCTGCCC
ACCATCGGCT TCTGCATCAT CGTCTCGCTG TGGCTGGACC TGAATGCGCA CTCACTGATG
TTTGGCGGCA TCTGGGCCGC GCTTGGCCTG ATCTACCTTG GCTGGCTGAC CAAAGCCTTC
CGCGCGGCAC CGCCCAACTA CATCGCCGAA TGA
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| Protein sequence | MQPDHRATGN GQLRKTLRLW HVIIIGLAYL TPMTVFDTFG IVSGITAGHV PSAYILALAG
ILFTAVSYGT LVKRFPQSGS AYTYTQKAIN PHVGFLVGWS SLLDYLLLPM VNALLAKLYL
SAMFPEVPEW MWVAGFVTLI SLINMRSVNL VAHFNLLFVG VQVAIIAVFI YLCVRGLDHG
EGLGTAWSLM PFADSQTQFS ALAAGATILC FSFLGFDAVT CLSEETRDPA KTIPRAIFLT
ALIGGVVFIT VSYFIQAYFP TMARFHDQEA ALPEIALYVG GKLFQSIFIA CTVINTIASG
LASQTSVSRL LYVMGRDNVI PASVFARLHS RYKTPVLNIA VVGIISLSAI FFDLVTATSI
INFGALVAFS FVNLSVINHC YLREGNRKGL ANQLKYLVLP TIGFCIIVSL WLDLNAHSLM
FGGIWAALGL IYLGWLTKAF RAAPPNYIAE
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