Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4179 |
Symbol | |
ID | 5871979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4676345 |
End bp | 4677103 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641549306 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_001670403 |
Protein GI | 167035172 |
COG category | [R] General function prediction only |
COG ID | [COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.562298 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCTTCG CGGTACTCGG AAGCGGTAGC CAAGGGAACG GCACGCTGAT CGCCAGTGGT GACACGTTCA TCCTGGTCGA TTGCGGCTTT TCCCTACGCG AAACCGAGCG GCGCCTGGCG CTGCTCGGTG TGTCGGCGGC CCAGCTCAGT GCAGTACTGG TCACCCACGA ACATGCTGAT CATGTGCATG GGGTCGGCTT GCTGTCACGG CGCTACAATG TACCGGTCTA CCTCAGCCAA GGGACCTTGC GCGGCATGCG CAAGCCGGTG GAGGTGGCCG GTTTTCTCGC TTGTGGCGAA AGCCTGCGCA TCGGCAGCCT GGAAGTGACT GCGGCGCGGG TCGAGCACGA CGCCTACGAG CCATTGCAAT ACGTGGTCAG TGACGGCCAG CGACGCTTCG GCATGCTTAC CGACCTGGGC TCGTACGACG CGTTGCTGCT GGAGCGCTAC CAGGGCCTGG ATGCACTGCT GATCGAGGCC AACCACTGCC GCGACCTGCT GGCGCGCGGT CACTACCCGG CCTTTTTGAA GCAGCGGGTA GGGGGCATGC AAGGGCATTT GAACAACCAC CAGGCCGCGC GCCTGGTGCA CGAGTTGGGC TGGAGCAACC TGCAACACCT GGTGCTGGCC CACCTCAGCA GCAAGAACAA CCTGCCACAC TTGGCCCGCC AGTGCTTCGT CGATACCCTC GGGTGCGACC CGGACTGGCT CCAGGTGGCG AATCAGGAAC ACGGGCTCGA CTGGCGCGAA ATCGCCTAG
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Protein sequence | MRFAVLGSGS QGNGTLIASG DTFILVDCGF SLRETERRLA LLGVSAAQLS AVLVTHEHAD HVHGVGLLSR RYNVPVYLSQ GTLRGMRKPV EVAGFLACGE SLRIGSLEVT AARVEHDAYE PLQYVVSDGQ RRFGMLTDLG SYDALLLERY QGLDALLIEA NHCRDLLARG HYPAFLKQRV GGMQGHLNNH QAARLVHELG WSNLQHLVLA HLSSKNNLPH LARQCFVDTL GCDPDWLQVA NQEHGLDWRE IA
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