Gene PputGB1_4170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4170 
Symbol 
ID5871969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4664438 
End bp4664818 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content48% 
IMG OID641549296 
Producthypothetical protein 
Protein accessionYP_001670394 
Protein GI167035163 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000000403496 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.117669 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCCAG AAATTGAAAA TGAGCTTCAT CATAGATACC CGAAGGTTCT GGGTTATATT 
GGCCCTGAGG GTGAATACAG GACGAAGCTG TGGGGTGGCT TCCAGCATGG AGATGGCTGG
CACGATCTAA TTGACACTCT ATGCGCATGC ATACAACAGC GAATCGAGTC TACCGGAGAG
TCAGTTCAGG TCAGCCAGGT CAAGGAAAAA TTCGGATCAC TACGCTTTTA TGTCGTAGGT
GGTGACGAAC AAATCAAGGG AATGATAGAT CTCGCAGAAT CACATTCAGA AAAAATCTGC
GAAGAGTGCG GACGGCCTGG CAAGCAAAAG AATGTCAAGG GATGGATTAT TACTCGCTGC
GACGACCACA CCCCGAAGTA A
 
Protein sequence
MSPEIENELH HRYPKVLGYI GPEGEYRTKL WGGFQHGDGW HDLIDTLCAC IQQRIESTGE 
SVQVSQVKEK FGSLRFYVVG GDEQIKGMID LAESHSEKIC EECGRPGKQK NVKGWIITRC
DDHTPK