Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4170 |
Symbol | |
ID | 5871969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 4664438 |
End bp | 4664818 |
Gene Length | 381 bp |
Protein Length | 126 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641549296 |
Product | hypothetical protein |
Protein accession | YP_001670394 |
Protein GI | 167035163 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000000000403496 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.117669 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCCAG AAATTGAAAA TGAGCTTCAT CATAGATACC CGAAGGTTCT GGGTTATATT GGCCCTGAGG GTGAATACAG GACGAAGCTG TGGGGTGGCT TCCAGCATGG AGATGGCTGG CACGATCTAA TTGACACTCT ATGCGCATGC ATACAACAGC GAATCGAGTC TACCGGAGAG TCAGTTCAGG TCAGCCAGGT CAAGGAAAAA TTCGGATCAC TACGCTTTTA TGTCGTAGGT GGTGACGAAC AAATCAAGGG AATGATAGAT CTCGCAGAAT CACATTCAGA AAAAATCTGC GAAGAGTGCG GACGGCCTGG CAAGCAAAAG AATGTCAAGG GATGGATTAT TACTCGCTGC GACGACCACA CCCCGAAGTA A
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Protein sequence | MSPEIENELH HRYPKVLGYI GPEGEYRTKL WGGFQHGDGW HDLIDTLCAC IQQRIESTGE SVQVSQVKEK FGSLRFYVVG GDEQIKGMID LAESHSEKIC EECGRPGKQK NVKGWIITRC DDHTPK
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