Gene PputGB1_4090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4090 
Symbol 
ID5871890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4571956 
End bp4573116 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content59% 
IMG OID641549218 
Producthypothetical protein 
Protein accessionYP_001670316 
Protein GI167035085 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.509512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGGCC GTAATGCCGG AAACCGCCCA GCGCTAGCAT CGCGGCTGTC GAAATTGATC 
ATGCAAGTTG CCGTGGGCAG TGCAGCAAGC TCGGGGGTGT TTCTGGCGGC CCCCAGGCGT
ACCGGTAAAT CCACCTTTGC ACGCGAAGAC CTTCGACCCG CTCTCGAAGC TGCGCAGGCA
ATCGTGCTGT ACGCCGACCT CTGGAAAGAC CTGACCAAAG ACCCAGGCCA AGTCATCGTG
GAAACCGTGC GTGAGGCGCT CGGGCGTAAC GAAGGCTTCA TTACGCGGCT GGCAAAGTCC
ACTGGCATGG AGAAGGTAAC CGTAGGTGGC CTGAATTTCA GCGTGGACAA GATCGGGCTG
GGGCAAGATG TCGATCTCAC CAGTGCGCTG GTCGCGCTCT CCGACGAATC ACGCAAGATC
ATCGTGCTGA TCATCGACGA GGCGCAACAT GCAATCACGA CCGACCAGGG AATAGCAGCC
TTGTTCGCCC TCAAAGCGGC CCGGGACGAA CTCAACAGCT CGAAGCACCA TGGGTTGCGC
ATCGTTTGCA CGGGCTCGAA CCGGGACAAA CTGGCCATGC TGCGCAATAG CAAAGATCAG
GCGTTCTTCG GCGCTGCGAT GGTGCAGTTC CCAACGCTGG ATCAGGGCTT CATCGACTGG
CTTTGCGCCA ACATCGATCT CCCCTGCGCA CTCGACCCGG TAGAGGTGTT CCAACTGTTC
AAAGAAAGCG GCTACCGCCC TGAGTTACTG GGCGCGGCAG CGGATGAAAT ACGCTTCGAC
TTCAGCATCG AGCCTGAAGC CGTACCGGCA CGGTTCCGAG AGCTTGTTCA GGCGCAAGCC
AATGACCTTA ACGCGAACCT GAAAAAGGTG ATCCACAGCC TCACTCCGAT TCAATCCGCC
GTTCTACGCG TCATGTGCGT AAAGGGTAAT GAATACGCAC CGTTTGAGGC CCCAACCCTG
GCACTGTACG CCAAAGCGAT GGAACGGGCG GGTGTGCAGG AAAGCGAAAT CAAGGCCGAG
GTGCCGGGGG TTCAGCAAGC GCTCATCGCC TTGCAGGACA AGCATCTGGT GTGGAGGGCA
TCACGGGGCG TATACGCGGT AGATGAGCAG GTAATCGTCG ATCTGGTCCG CGCTGATGGC
TTGCTGGAAG GGCTTGGCTG A
 
Protein sequence
MGGRNAGNRP ALASRLSKLI MQVAVGSAAS SGVFLAAPRR TGKSTFARED LRPALEAAQA 
IVLYADLWKD LTKDPGQVIV ETVREALGRN EGFITRLAKS TGMEKVTVGG LNFSVDKIGL
GQDVDLTSAL VALSDESRKI IVLIIDEAQH AITTDQGIAA LFALKAARDE LNSSKHHGLR
IVCTGSNRDK LAMLRNSKDQ AFFGAAMVQF PTLDQGFIDW LCANIDLPCA LDPVEVFQLF
KESGYRPELL GAAADEIRFD FSIEPEAVPA RFRELVQAQA NDLNANLKKV IHSLTPIQSA
VLRVMCVKGN EYAPFEAPTL ALYAKAMERA GVQESEIKAE VPGVQQALIA LQDKHLVWRA
SRGVYAVDEQ VIVDLVRADG LLEGLG