Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4090 |
Symbol | |
ID | 5871890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 4571956 |
End bp | 4573116 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641549218 |
Product | hypothetical protein |
Protein accession | YP_001670316 |
Protein GI | 167035085 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.509512 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAGGCC GTAATGCCGG AAACCGCCCA GCGCTAGCAT CGCGGCTGTC GAAATTGATC ATGCAAGTTG CCGTGGGCAG TGCAGCAAGC TCGGGGGTGT TTCTGGCGGC CCCCAGGCGT ACCGGTAAAT CCACCTTTGC ACGCGAAGAC CTTCGACCCG CTCTCGAAGC TGCGCAGGCA ATCGTGCTGT ACGCCGACCT CTGGAAAGAC CTGACCAAAG ACCCAGGCCA AGTCATCGTG GAAACCGTGC GTGAGGCGCT CGGGCGTAAC GAAGGCTTCA TTACGCGGCT GGCAAAGTCC ACTGGCATGG AGAAGGTAAC CGTAGGTGGC CTGAATTTCA GCGTGGACAA GATCGGGCTG GGGCAAGATG TCGATCTCAC CAGTGCGCTG GTCGCGCTCT CCGACGAATC ACGCAAGATC ATCGTGCTGA TCATCGACGA GGCGCAACAT GCAATCACGA CCGACCAGGG AATAGCAGCC TTGTTCGCCC TCAAAGCGGC CCGGGACGAA CTCAACAGCT CGAAGCACCA TGGGTTGCGC ATCGTTTGCA CGGGCTCGAA CCGGGACAAA CTGGCCATGC TGCGCAATAG CAAAGATCAG GCGTTCTTCG GCGCTGCGAT GGTGCAGTTC CCAACGCTGG ATCAGGGCTT CATCGACTGG CTTTGCGCCA ACATCGATCT CCCCTGCGCA CTCGACCCGG TAGAGGTGTT CCAACTGTTC AAAGAAAGCG GCTACCGCCC TGAGTTACTG GGCGCGGCAG CGGATGAAAT ACGCTTCGAC TTCAGCATCG AGCCTGAAGC CGTACCGGCA CGGTTCCGAG AGCTTGTTCA GGCGCAAGCC AATGACCTTA ACGCGAACCT GAAAAAGGTG ATCCACAGCC TCACTCCGAT TCAATCCGCC GTTCTACGCG TCATGTGCGT AAAGGGTAAT GAATACGCAC CGTTTGAGGC CCCAACCCTG GCACTGTACG CCAAAGCGAT GGAACGGGCG GGTGTGCAGG AAAGCGAAAT CAAGGCCGAG GTGCCGGGGG TTCAGCAAGC GCTCATCGCC TTGCAGGACA AGCATCTGGT GTGGAGGGCA TCACGGGGCG TATACGCGGT AGATGAGCAG GTAATCGTCG ATCTGGTCCG CGCTGATGGC TTGCTGGAAG GGCTTGGCTG A
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Protein sequence | MGGRNAGNRP ALASRLSKLI MQVAVGSAAS SGVFLAAPRR TGKSTFARED LRPALEAAQA IVLYADLWKD LTKDPGQVIV ETVREALGRN EGFITRLAKS TGMEKVTVGG LNFSVDKIGL GQDVDLTSAL VALSDESRKI IVLIIDEAQH AITTDQGIAA LFALKAARDE LNSSKHHGLR IVCTGSNRDK LAMLRNSKDQ AFFGAAMVQF PTLDQGFIDW LCANIDLPCA LDPVEVFQLF KESGYRPELL GAAADEIRFD FSIEPEAVPA RFRELVQAQA NDLNANLKKV IHSLTPIQSA VLRVMCVKGN EYAPFEAPTL ALYAKAMERA GVQESEIKAE VPGVQQALIA LQDKHLVWRA SRGVYAVDEQ VIVDLVRADG LLEGLG
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