| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4081 |
|---|
| Symbol | |
|---|
| ID | 5871881 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 4535163 |
|---|
| End bp | 4536023 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641549209 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001670307 |
|---|
| Protein GI | 167035076 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1262] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.966684 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTAT CCACCTGGCT CTACCGGCCA GCCCAGATCA CCTGCCTGCT GCTGGTCAGC
GCCTACGCCC ACGCCGCCAA GCCCGGCGAC GTGTTCAAAG ACTGCAAGGA CTGCCCGGAA
ATGGTCGTGC TGCCCGCCGG CAGCTACGTG ATGGGCGCGC CCGACGACGA AGTCGGCCGC
CAGCCCGACG AAGGCCCATT GCACACCGTG ACCTTCGCCA AGCCGTTCGC CATGAGCCGC
TACCAGGTTA CCGCCGGCGA ACTGGATGCC TATATCAAGG CCACCGGCAC CGTCATCAAA
AGCGGTGACG ACCGCCCCGG CCGCTGGTGC GAGGCCAGCA AGCCGACCTA CAAGCAAGGC
CCCCGCCAGC CGGCGGTGTG CGTCGACTAC GACGAAGTGC AGGCCTACGC CCAGTGGCTG
GCCAAGACCA CCGGCAAACC CTACCGCATG GTCAGCGAGG CCGAGCGCGA ATACGCCGCC
CGCGGTGGTT CCACCGGGCC GTTCCCCTTC CCCTTCGACG AGCCGGGCAA GTATGAGATC
AGCAAGCACG CCAACACCTA CGGCCCCCGC GACGGCTACA CCTACACCGC GCCGGTGGGC
AGCTACCCGG CCAATGCCTT CGGCATGTAC GACATGCACG GCAACGTCTA CGAGTGGGTT
GCCGACTGCT ACCACGAAAG CTACGAAGGC GCCCCAAGCG ACGGCAGTGC CTGGATCCAG
GACCCCACGT GCATCCGCGC GCACATGCGT GGCAACGACT GGGGCGAGCC GCCGATCTTC
TCGCGCTCAG CCAACCGCAA CGACCGCCTC AAGACCACCC GCGGCGACTT CCTCGGTTTT
CGTGTAGCAC GCGAATTGTG A
|
|---|
| Protein sequence | MNVSTWLYRP AQITCLLLVS AYAHAAKPGD VFKDCKDCPE MVVLPAGSYV MGAPDDEVGR
QPDEGPLHTV TFAKPFAMSR YQVTAGELDA YIKATGTVIK SGDDRPGRWC EASKPTYKQG
PRQPAVCVDY DEVQAYAQWL AKTTGKPYRM VSEAEREYAA RGGSTGPFPF PFDEPGKYEI
SKHANTYGPR DGYTYTAPVG SYPANAFGMY DMHGNVYEWV ADCYHESYEG APSDGSAWIQ
DPTCIRAHMR GNDWGEPPIF SRSANRNDRL KTTRGDFLGF RVAREL
|
|---|
| |