Gene PputGB1_4028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4028 
Symbol 
ID5871828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4480198 
End bp4481091 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content64% 
IMG OID641549156 
ProductLysR family transcriptional regulator 
Protein accessionYP_001670254 
Protein GI167035023 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.119859 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0962956 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTCGA CCCTGCCCGA CCTGAAACTG CTGCGCATCT TCATCAGCGT GGTGCGCCAC 
CAGGGCTTTG CCAACGCCCA GCGCGAACTG AACCTGTCCA CCTCGGCCAT CAGCACCTAC
ATGAGCCAGC TGGAGGGTGC TTTGGGTATC GTGCTGTGCC ACCGTGGGCG TGGGGGCTTC
AGCCTGACCA GCAAGGGCGA GCTGTTCCAT CAGGAAACCC TGCGCCTGCT GGCCGAGCTG
GACGGCTTCG AGCAGTATGC CGCCGCCCTC AAAGGCGAGT TGCGCGGCAC CCTCAATCTT
GGGGTGATCG ACTCCACGGT CGGCGACCGT GCCTTGCCGC TGGCCGAGGC CATCGGGGCC
TATAGCCAGG AACACCCGGC GGTGCACCTG CATCTGTCGG TGTCCAGCCC TTACGAGCTG
CAACTGGGTG TGCAGGACAA CCGCCTGGAC CTGGCCATCG GCGCGTTTTC TTCGCGCATG
AGCGGGCTGC TTTACCAGCC GCTGTACCGT GAACAGCATT GGTTGTACTG CAGCAGCCGC
CATCCGCTGT ACACCGAGCG GCGCATTCCC GAGCAGGTGG TGACCCAGCA GCGCATGGTC
GGGCGCGGCT ACTGGAGCCA GGCCGAACTG GCCCGGCATG GCTTCAAGCA CAGCGCGGCA
ACAGTGGAAA GTATGGAGGC GCAGTTGATC CTGATCCTTT CCGGCGCCTA CATCGGCTAC
TTGCCCGAGC ACTACGCCCA GGCCTGGGTC GACAAGGGCG ACTTGCGCGT GCTGTCGCCG
TCGACCTTCG GTTACCAGGC CCCGTTCTCG CTGATCATTC GCCGTGGGCG TAGCCGTGAA
CCGTTGATCC AGACCTTCCG TGACCTGCTG AAAAGCCAAC TCAACGTGGG CTGA
 
Protein sequence
MASTLPDLKL LRIFISVVRH QGFANAQREL NLSTSAISTY MSQLEGALGI VLCHRGRGGF 
SLTSKGELFH QETLRLLAEL DGFEQYAAAL KGELRGTLNL GVIDSTVGDR ALPLAEAIGA
YSQEHPAVHL HLSVSSPYEL QLGVQDNRLD LAIGAFSSRM SGLLYQPLYR EQHWLYCSSR
HPLYTERRIP EQVVTQQRMV GRGYWSQAEL ARHGFKHSAA TVESMEAQLI LILSGAYIGY
LPEHYAQAWV DKGDLRVLSP STFGYQAPFS LIIRRGRSRE PLIQTFRDLL KSQLNVG