| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4020 |
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| Symbol | |
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| ID | 5871820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4469956 |
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| End bp | 4472142 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641549148 |
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| Product | patatin |
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| Protein accession | YP_001670246 |
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| Protein GI | 167035015 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0160946 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGTT TGCTGTTCTG TTTTCTGCTT GCCCTCACCA CGCTTGCGGC AACCGCCGCC
GAACCTGCCA GGCCCAAGGT CGGCCTGGTA CTGTCGGGTG GTGCGGCCCG TGGCCTGGCT
CACATCGGCG TGCTCAAGGC GCTGGAAGAA CAGGGTGTGC GCATCGACGC CATCGCCGGC
ACCAGCATGG GCGCAGTGGT CGGCGGGTTG TACGCCTCGG GCTACAGTGT CGAAGAGCTG
GAAAAGCTCG CCACCACCCT GGACTGGCAA CAGGCGCTGT CCGATGCCCC GCCACGCAAG
GACGTGCCGT TTAGGCGCAA GCAGGATGAC CGCGACTTCC TGGTCAAACA GAAGCTCAGC
TTTCGTGACG ACGGCAGCCT GGGCCTGCCA CTGGGGGTAA TCCAGGGCCA GAACTTGTCA
CTGCTGCTGG AAAGCAAACT GGCGCACACC GCCGACACCC GCGACTTCGA CAAGCTGCCT
ATCCCCTTCC GCGCCGTGGC CACCGACATC GCCAGTGGCG AAAAAGTAGT GTTTCGCCGC
GGCCACCTGC CACAGGTCAT TCGCGCCAGC ATGTCGATCC CTGCCGTGTT CGCCCCGGTC
GAGCTGGACG GCCGACTGCT GGTGGACGGT GGCATGGTCG ACAACATTCC GGTCGACGTG
GCCCGCGAAA TGGGCGTGGA CCTGGCCATC GTGGTCGACA TCGGCACCCC ACTGAAGGAT
CGCAAGCAAT TACTGACCGT GGTCGACGTG CTCAACCAGT CGATCACCCT GATGACCCGG
CGCAACTCGG AAGAACAACT GGCCAGCCTG CACCGCGACG ACATCCTCAT CCAACCATCG
CTGACCGCCT TCGGCGTGAC CGATTTTGGC CGCGCCAGGG ACATGATCGA CGCCGGTTAC
CGCGCCACCC GCCTGCTCGA CCCTCGCCTG GCTGCCCTGC GCCAGCCCGA AGGCGACAGC
AGCCTGGCCG TGGCCCGCTC GCCGCGCCAG CGCACACCGG TGATCACCGC GATCCGAATC
GAGAACGACT CCAAGGTCAG CGACGACGTG ATTCGCTCGT ACATCCGCCA ACCGATCGAC
GCGCCGTTGG AGCTGGACCG CCTGCAGACC GACATGGGTA CGCTGTACGG CCTGGATTAC
TTCGACCGGG TGCAGTACCG CGTGGTGCAC AAGGGCGACG ACAACACCCT GGTGATCAAC
GCCCGTGGCC GGCGCGGCGG CACCGACTAC CTGCGTCTGG GCCTTAACCT GTCCGATGAC
CTGCGTGGCG ACAGCGCCTT CAACCTGGGT GCCAGCTACC GGGTCAACGG CATCAACAGC
CTCGGCGCAG AATGGCTGAC CCGTGGCCAG ATCGGCGACC AGCAAGAGCT GTACAGCGAG
TTCTACCAAC CGCTGGACGT GGGCTCGCGC TACTTTGTCG CGCCTTACCT GGATTTCAGC
TCGCAGAACA TCGAAGCCAC CCTGGACAAC GACCCGGTCG CCGAATACCG CCTGGAGCGC
TACGGCTTTG GCCTGAACGT GGGCCGGCAG ATCGGCACCA GCGGTGAAGT GCGCCTGGGC
GTGGGCAAGG CCTGGGGCGA GGCCGAGGTG CGCATCGGCG ACCAGGACCT GCCCAAAGTC
AGTTTCAACG AAGGCTTCTA CGAGCTGAAG TACTCGTTCG ACACCCTCGA CAACGTGTAC
TTCCCGCACC GAGGCGAGGA CATCGGCCTG ACCTTGCGCA AATACGACAA GTCGCTGGAC
TCCGACCAGG ATTACCGGCA GTGGCTGTTC AACCTGGACA AGGCGATCAG CAGTGGGCCG
AACACCTTCG TGCTGGGCGG TCGCTATGGG CGCACGCTGG ATGACACCGA AGTGGTGACG
TCGAGCTTCG TGATGGGCGG AGCGCGAGAG CTGTCAGGCT TTCGCCAGGA CTCGGTGTCG
GGGCAGAACG TGAGCCTGCT GCGCATGGTC TACTACCGCC GCTTGACGCC AAGGGCCTAT
GTGCCGCTGG ACTTCCCGTT GTACATCGGC GGGTCGCTGG AGCGTGGGCG GGCATGGAAC
AACGACAACG AGTTCGACAG TGGGTACATC AATGCGGCGA GCATCTTCCT GGGGCTGGAG
ACGCCGTTGG GGCCGTTGAA CTTCACCTAC GGCACCAACA GTGCGCATGA GCATGCGGTG
TATCTGAACC TGGGGCATAC CTTCTGA
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| Protein sequence | MRRLLFCFLL ALTTLAATAA EPARPKVGLV LSGGAARGLA HIGVLKALEE QGVRIDAIAG
TSMGAVVGGL YASGYSVEEL EKLATTLDWQ QALSDAPPRK DVPFRRKQDD RDFLVKQKLS
FRDDGSLGLP LGVIQGQNLS LLLESKLAHT ADTRDFDKLP IPFRAVATDI ASGEKVVFRR
GHLPQVIRAS MSIPAVFAPV ELDGRLLVDG GMVDNIPVDV AREMGVDLAI VVDIGTPLKD
RKQLLTVVDV LNQSITLMTR RNSEEQLASL HRDDILIQPS LTAFGVTDFG RARDMIDAGY
RATRLLDPRL AALRQPEGDS SLAVARSPRQ RTPVITAIRI ENDSKVSDDV IRSYIRQPID
APLELDRLQT DMGTLYGLDY FDRVQYRVVH KGDDNTLVIN ARGRRGGTDY LRLGLNLSDD
LRGDSAFNLG ASYRVNGINS LGAEWLTRGQ IGDQQELYSE FYQPLDVGSR YFVAPYLDFS
SQNIEATLDN DPVAEYRLER YGFGLNVGRQ IGTSGEVRLG VGKAWGEAEV RIGDQDLPKV
SFNEGFYELK YSFDTLDNVY FPHRGEDIGL TLRKYDKSLD SDQDYRQWLF NLDKAISSGP
NTFVLGGRYG RTLDDTEVVT SSFVMGGARE LSGFRQDSVS GQNVSLLRMV YYRRLTPRAY
VPLDFPLYIG GSLERGRAWN NDNEFDSGYI NAASIFLGLE TPLGPLNFTY GTNSAHEHAV
YLNLGHTF
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