| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3992 |
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| Symbol | |
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| ID | 5871792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4440426 |
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| End bp | 4442387 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641549120 |
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| Product | acetyl-CoA synthetase |
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| Protein accession | YP_001670218 |
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| Protein GI | 167034987 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR02188] acetate--CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.733733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.105895 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCGG CTCCACTGTA TCCCGTTCGT CCCGAGGTTG CGGCCACTAC CCTGACCGAC
GAGGCCACCT ACAAGGCCAT GTACCAGCAG TCGGTGATCA ACCCGGACGG CTTCTGGCGC
GAGCAGGCCC AGCGCATCGA CTGGATCAAG CCGTTCACCA AGGTCAAGCA GACCTCCTTC
GACGACCACC ATGTCGATAT CAAATGGTTC GCCGACGGCA CTCTGAACGT TTCCTCCAAC
TGCCTGGACC GCCACCTTGA AGAGCGCGGC GACCAGTTGG CCATCATCTG GGAAGGCGAC
GACCCTTCCG AACACCGCAA CATCACCTAC CGCGAACTGC ACGAGCAGGT CTGCAAGTTC
GCCAACGCCC TGCGCGGCCA GGACGTGCAC CGGGGTGACG TAGTCACCAT CTATATGCCA
ATGATCCCCG AGGCTGTGGT TGCCATGCTG GCCTGTGCCC GTATCGGTGC GATTCATTCG
GTGGTGTTTG GCGGTTTCTC GCCCGAGGCG CTGGCCGGCC GTATCATCGA CTGCAAGTCC
AAGGTGGTGA TCACCGCCGA TGAAGGCGTG CGTGGCGGCC GTCGTACCCC GCTCAAGGCT
AACGTCGACC TGGCACTGAC CAACCCTGAA ACCAGCAGTG TGCAGAAAAT CATCGTGTGC
AAGCGCACCG GTGGCGACAT TGCCTGGCAC CAACACCGCG ACATCTGGTA CGAAGACCTG
ATGAAAGTGG CCTCCAGCCA CTGCGCGCCG AAAGAGATGG GTGCCGAAGA AGCGCTGTTC
ATCCTTTATA CCTCCGGCTC CACCGGCAAA CCGAAGGGCG TGCTGCACAC CACCGGCGGT
TACCTGGTGT ACGCGGCACT GACCCATGAG CGCGTTTTCG ACTACCGCCC GGGCGAGGTG
TACTGGTGCA CCGCCGACGT CGGTTGGGTC ACCGGCCACA GCTACATCGT CTACGGCCCG
CTGGCCAACG GCGCCACTAC CTTGCTGTTC GAGGGCGTGC CTAACTACCC GGACATCACC
CGCGTGTCGA AGATCGTCGA CAAACACAAG GTCAACATCC TCTACACCGC GCCAACTGCC
ATCCGCGCCA TGATGGCCGA AGGGCAAGCG GCTGTAGAGG GAGCAGACGG CTCCAGCCTG
CGCCTTCTGG GTTCGGTGGG TGAGCCGATC AACCCAGAAG CCTGGAACTG GTACTACAAG
ACCGTAGGCA AGGAGCGTTG CCCGATCGTC GACACCTGGT GGCAGACTGA AACCGGCGGC
ATTTTGATCA GCCCGCTGCC TGGCGCCACC GGCTTGAAAC CGGGGTCGGC AACCCGTCCG
TTCTTTGGTG TGGTGCCGGC ATTGGTCGAT AACCTGGGCA ACCTGATCGA AGGTGCCACC
GAAGGTAACC TGGTAATTCT GGACTCCTGG CCGGGCCAGT CGCGTTCGCT GTACGGCGAC
CACGACCGCT TCGTCGACAC CTACTTCAAG ACCTTCCGTG GCATGTACTT CACCGGCGAC
GGTGCGCGCC GTGACGAGGA TGGCTACTAC TGGATCACCG GCCGTGTGGA CGACGTGCTC
AACGTCTCCG GCCACCGCAT GGGCACTGCC GAGATCGAAA GTGCGATGGT CGCGCATACG
AAGGTTGCCG AGGCCGCAGT GGTTGGCGTG CCGCACGACA TCAAGGGGCA GGGCATCTAT
GTCTATGTCA CCCTCAATGC CGGTATCGAG GCCAGCGAGC AATTGCGTCT GGAGCTGAAG
AACTGGGTGC GCAAGGAAAT CGGCCCGATC GCTTCGCCGG ATGTGATCCA GTGGGCGCCT
GGGTTACCGA AGACTCGCTC GGGCAAGATC ATGCGTCGGA TCCTGCGCAA GATCGCCACC
GGTGAGTACG ATGCCCTGGG CGATATCTCG ACCTTGGCCG ACCCTGGCGT GGTGCAGCAC
CTGATCGACA CTCATAAGGC GATGAACCTG GCTTCTGCCT GA
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| Protein sequence | MSAAPLYPVR PEVAATTLTD EATYKAMYQQ SVINPDGFWR EQAQRIDWIK PFTKVKQTSF
DDHHVDIKWF ADGTLNVSSN CLDRHLEERG DQLAIIWEGD DPSEHRNITY RELHEQVCKF
ANALRGQDVH RGDVVTIYMP MIPEAVVAML ACARIGAIHS VVFGGFSPEA LAGRIIDCKS
KVVITADEGV RGGRRTPLKA NVDLALTNPE TSSVQKIIVC KRTGGDIAWH QHRDIWYEDL
MKVASSHCAP KEMGAEEALF ILYTSGSTGK PKGVLHTTGG YLVYAALTHE RVFDYRPGEV
YWCTADVGWV TGHSYIVYGP LANGATTLLF EGVPNYPDIT RVSKIVDKHK VNILYTAPTA
IRAMMAEGQA AVEGADGSSL RLLGSVGEPI NPEAWNWYYK TVGKERCPIV DTWWQTETGG
ILISPLPGAT GLKPGSATRP FFGVVPALVD NLGNLIEGAT EGNLVILDSW PGQSRSLYGD
HDRFVDTYFK TFRGMYFTGD GARRDEDGYY WITGRVDDVL NVSGHRMGTA EIESAMVAHT
KVAEAAVVGV PHDIKGQGIY VYVTLNAGIE ASEQLRLELK NWVRKEIGPI ASPDVIQWAP
GLPKTRSGKI MRRILRKIAT GEYDALGDIS TLADPGVVQH LIDTHKAMNL ASA
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