Gene PputGB1_3961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3961 
Symbol 
ID5871755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4405272 
End bp4405757 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content59% 
IMG OID641549083 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001670187 
Protein GI167034956 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.537786 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAAC TCGATCGTAC CGATATCGGC ATTCTCAACA GCCTGCAGGA AAACGCCCGC 
ATCACCAACG CCGAGCTGGC ACGCTCGGTC AACCTGTCGC CCACGCCCTG TTTCAACCGG
GTGCGGGCCA TGGAAGAACT GGGGGTGATC CGCCAGCAGG TGACCTTGTT GTCGCCCGAG
GCGTTGGGGC TGGATGTGAA TGTGTTCATC CATGTCAGCC TGGAAAAACA GGTAGAGCAG
TCGTTGCACC GCTTCGAGGA AGAAATTGCC GAACGGCCCG AGGTGATGGA GTGCTACCTG
ATGACCGGGG ACCCGGATTA CCTGCTACGG GTGCTGTTGC CGAGTATCCA GGCGCTGGAG
CGCTTTCTCG ACTACCTGAC CCGGTTGCCG GGGGTGGCAA ATATCCGCTC GAGTTTTGCC
TTGAAACAGG TGCGCTACAA GACGGCCTTG CCGTTGCCGG CCAATGGCAT GACCTTGCGC
GAATAG
 
Protein sequence
MRKLDRTDIG ILNSLQENAR ITNAELARSV NLSPTPCFNR VRAMEELGVI RQQVTLLSPE 
ALGLDVNVFI HVSLEKQVEQ SLHRFEEEIA ERPEVMECYL MTGDPDYLLR VLLPSIQALE
RFLDYLTRLP GVANIRSSFA LKQVRYKTAL PLPANGMTLR E