Gene PputGB1_3957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3957 
Symbol 
ID5871751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4400991 
End bp4401458 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content64% 
IMG OID641549079 
ProductFlgN family protein 
Protein accessionYP_001670183 
Protein GI167034952 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3418] Flagellar biosynthesis/type III secretory pathway chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGACA CCACCTTGCT GCAACTGATC GAAGATGACA TTGCCCCGAT GCAGGAACTG 
CTCGACCTTC TGCACAAGGA GGCGATCGCC CTGCATGGCC GCGACATGCC GCTGCTGGAG
CAAATCCTGG CGCGCAAGCA GTCGTTGATC ATCTTGCTCG AGCAGCACGG CCAGCGCCGC
AGCCAATTGC TCGGCAGCCT GGGCCTGAGT GCCGACCGCA GCGGTGTGCA GGCGGTAGCC
GCGCAGTCGC CGCATGGCGA TGTGATGCTG CAGCGCCTCG ACATGCTGTC GCAACTGATG
GACGACTGCC AACAGGTCAA CCAGACCAAT GGCCGGATCA TCCAGGTGCA GCAACACGTC
ACCAACAACC AGGTCAGGAT CCTCATGGGC GGCGATTCGC CCTCGCTCTA CGACAGCCGC
GGCAGCACCT CGCCGCTGGC CAAGCCGCGC GCCCTCAGCC AAGTGTGA
 
Protein sequence
MHDTTLLQLI EDDIAPMQEL LDLLHKEAIA LHGRDMPLLE QILARKQSLI ILLEQHGQRR 
SQLLGSLGLS ADRSGVQAVA AQSPHGDVML QRLDMLSQLM DDCQQVNQTN GRIIQVQQHV
TNNQVRILMG GDSPSLYDSR GSTSPLAKPR ALSQV