Gene PputGB1_3954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3954 
Symbol 
ID5871748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4398703 
End bp4399632 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content60% 
IMG OID641549076 
Productresponse regulator receiver modulated CheW protein 
Protein accessionYP_001670180 
Protein GI167034949 
COG category[N] Cell motility
[T] Signal transduction mechanisms
[K] Transcription 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGTG TTATGGATTC GGTCAACCAG CGCACGCAGC TGGTGGGGCA GAATCGCCTG 
GAATTGCTGC TGTTCCGCCT CAATGGCGAA CAGCTATACG GCATCAACGT ATTCAAGGTC
AGGGAAGTGC TGCAATGCCC TGCGCTGACC CTGCTGCCCA AGGCGCACCC GGTGGTGCGT
GGCGTTGCCA ATATCCGTGG GGCGACCATC CCGATCCTCG ACTTGTCGAT GGCCACCGGG
TTGCGACCGC TGCGGGAAGA CACGCGCAAC AGCTTCGTGA TCATCACCGA GTACAACACC
AAGACCCAGG GCTTCCTGGT GCACTCGGTG GAGCGCATCG TCAACATGAA CTGGGAAGAG
ATTCATCCGC CACCCAAGGG GACCGGTCGC GACCACTACC TGACGGCGGT CACCCGGGTG
GACAACCGCA TGGTCGAGAT CATCGACGTG GAAAAGGTGC TGGCTGAAGT GTCGCCTTCG
TCCGAGTCGG TATCGGCTGG GGTGATCGAT GCCGAGGTGC AGGACAAGGC CGTGCTGATG
CGGGTGCTGA CCGTCGACGA TTCGTCGGTG GCGCGCAAGC AGGTCAGCCG CTGCCTGCAG
ACCGTAGGGG TCGAAGTGGT TGCGCTCAAC GATGGCCGTC AGGCTCTGAA CTACCTGCGT
CAGTTGGTGG ATGAGGGCAA AAAGCCGGAA GAAGAGTTCC TGATGATGAT CTCGGACATT
GAAATGCCGG AAATGGACGG CTACACGCTC ACGGCGGAGA TCCGCAGCGA CCCGCGTATG
CAAAAATTGC ACATCTGCCT GCATACTTCG CTTTCCGGGG TGTTCAACCA GGCAATGGTC
AAGAAGGTCG GTGCCGATGA CTTCCTGGCC AAGTTCAAGC CGGACGACCT GGCCCAGCGG
GTGGTCGACC GGATCAAGGC AGCGCATTGA
 
Protein sequence
MAGVMDSVNQ RTQLVGQNRL ELLLFRLNGE QLYGINVFKV REVLQCPALT LLPKAHPVVR 
GVANIRGATI PILDLSMATG LRPLREDTRN SFVIITEYNT KTQGFLVHSV ERIVNMNWEE
IHPPPKGTGR DHYLTAVTRV DNRMVEIIDV EKVLAEVSPS SESVSAGVID AEVQDKAVLM
RVLTVDDSSV ARKQVSRCLQ TVGVEVVALN DGRQALNYLR QLVDEGKKPE EEFLMMISDI
EMPEMDGYTL TAEIRSDPRM QKLHICLHTS LSGVFNQAMV KKVGADDFLA KFKPDDLAQR
VVDRIKAAH