| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3954 |
|---|
| Symbol | |
|---|
| ID | 5871748 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 4398703 |
|---|
| End bp | 4399632 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641549076 |
|---|
| Product | response regulator receiver modulated CheW protein |
|---|
| Protein accession | YP_001670180 |
|---|
| Protein GI | 167034949 |
|---|
| COG category | [K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG0835] Chemotaxis signal transduction protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGGTG TTATGGATTC GGTCAACCAG CGCACGCAGC TGGTGGGGCA GAATCGCCTG
GAATTGCTGC TGTTCCGCCT CAATGGCGAA CAGCTATACG GCATCAACGT ATTCAAGGTC
AGGGAAGTGC TGCAATGCCC TGCGCTGACC CTGCTGCCCA AGGCGCACCC GGTGGTGCGT
GGCGTTGCCA ATATCCGTGG GGCGACCATC CCGATCCTCG ACTTGTCGAT GGCCACCGGG
TTGCGACCGC TGCGGGAAGA CACGCGCAAC AGCTTCGTGA TCATCACCGA GTACAACACC
AAGACCCAGG GCTTCCTGGT GCACTCGGTG GAGCGCATCG TCAACATGAA CTGGGAAGAG
ATTCATCCGC CACCCAAGGG GACCGGTCGC GACCACTACC TGACGGCGGT CACCCGGGTG
GACAACCGCA TGGTCGAGAT CATCGACGTG GAAAAGGTGC TGGCTGAAGT GTCGCCTTCG
TCCGAGTCGG TATCGGCTGG GGTGATCGAT GCCGAGGTGC AGGACAAGGC CGTGCTGATG
CGGGTGCTGA CCGTCGACGA TTCGTCGGTG GCGCGCAAGC AGGTCAGCCG CTGCCTGCAG
ACCGTAGGGG TCGAAGTGGT TGCGCTCAAC GATGGCCGTC AGGCTCTGAA CTACCTGCGT
CAGTTGGTGG ATGAGGGCAA AAAGCCGGAA GAAGAGTTCC TGATGATGAT CTCGGACATT
GAAATGCCGG AAATGGACGG CTACACGCTC ACGGCGGAGA TCCGCAGCGA CCCGCGTATG
CAAAAATTGC ACATCTGCCT GCATACTTCG CTTTCCGGGG TGTTCAACCA GGCAATGGTC
AAGAAGGTCG GTGCCGATGA CTTCCTGGCC AAGTTCAAGC CGGACGACCT GGCCCAGCGG
GTGGTCGACC GGATCAAGGC AGCGCATTGA
|
|---|
| Protein sequence | MAGVMDSVNQ RTQLVGQNRL ELLLFRLNGE QLYGINVFKV REVLQCPALT LLPKAHPVVR
GVANIRGATI PILDLSMATG LRPLREDTRN SFVIITEYNT KTQGFLVHSV ERIVNMNWEE
IHPPPKGTGR DHYLTAVTRV DNRMVEIIDV EKVLAEVSPS SESVSAGVID AEVQDKAVLM
RVLTVDDSSV ARKQVSRCLQ TVGVEVVALN DGRQALNYLR QLVDEGKKPE EEFLMMISDI
EMPEMDGYTL TAEIRSDPRM QKLHICLHTS LSGVFNQAMV KKVGADDFLA KFKPDDLAQR
VVDRIKAAH
|
|---|
| |