Gene PputGB1_3942 details

Gene Information

• Locus tag: PputGB1_3942
• Symbol: flgK
• ID: 5871736
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas putida GB-1
• Kingdom: Bacteria
• Replicon accession: NC_010322
• Strand: -
• Start bp: 4387482
• End bp: 4389524
• Gene Length: 2043 bp
• Protein Length: 680 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 641549064
• Product: flagellar hook-associated protein FlgK
• Protein accession: YP_001670168
• Protein GI: 167034937
• COG category: [N] Cell motility
• COG ID: [COG1256] Flagellar hook-associated protein
• TIGRFAM ID: [TIGR02492] flagellar hook-associated protein FlgK

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 54
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCGAGCC TGATTTCGAT CGGCCTGAGT GGCCTGAGTG CCAGCCAGGC GGCCTTGTCG 
GTAACCAGTA ACAACATCGC CAACGCCGCG ACCAGTGGCT ATTCGCGCCA GCAGACGATT 
CAGGCAGCGG GGGCCTCGCA CAACATCGGC GCCGGGTTCC TGGGTACAGG TACCACGCTG 
GCGGATGTGC GCCGCATTTA TAGCTCCTAC CTGGACAACC AACTGCAGAC CGCCACCTCG 
TTGCAGGCGG ACTCGGTTGC CTTCCAGGAC CAGATCACCA GCATCGACAA GCTGCTGGCC 
GACCGTGACA CCGGCATCAG CTCGGTGCTC ACCGCATTCT TCTCGGCCCT GCAGACTGCA 
GCGGCCAAGC CCGGTGACGT CGCTTCGCGC CAGCTGCTGC TGACTCAGGC GCAAACCCTG 
AGCAACCGTT TCAACGCAGT GAGCACCCAG CTCACCCAGC AGAATGCCAC GATCAACTCC 
CAGCTCGACA CCATGGCCGG CCAGGTCAAC AAGCTGACCG CCAGCATTGC CGAGTACAAC 
AAGCAGATCG CCGCGGCCAG CGGCACTGGC AACACCCCTA ACAGCCTGTT GGATGCGCGC 
AGCGAAGCGG TGCGTCAGCT TAACGAGCTG GTGGGTGTCA CGGTGCAGGA GCGTGACGGC 
AACTACGACG TGTACTTGGG CAGCGGCCAG TCGTTGGTAA CCGGCAACAA GGCCAACACC 
CTGTCGGTAG AGCCTGGTGC TGCCGACAAG AGCCAGGCCA GCCTGCGTAT CAACTACGAG 
TCGTTCAGCT CTGATGTGAC CTCGGTGGTG ACCGGTGGCG CGATCGGTGG CCTGTTGCGC 
TATCGCCAGG ATGTGCTGAC GCCGTCGATG AACGAGCTGG GGCGCGTTGC CCTGGTGGTG 
GCTGACAGCA TCAACAGCCA GTTGGGGCAG GGCCTGGATG CCAATGGCCA GTTCGGCAGC 
TCGCTGTTCT CCAGCATCAA CAGTGCCACT GCCCTTGCGC AGCGCAGCCT GGCCTCGTCG 
AACAACAGTT CCGGCTCTGG CAACCTGGAT GTGACCATCG CCAACAGCGG TGCGCTGACC 
ACCTACGACT ACGAGGTCAA GTTCACCAGC GCCAACCAGT ACAGCGTGCG CCGTTCCGAC 
GGCACCGACA TGGGCAGCTT CGACCTCAAC GCCAACCCGG CGCCGGTGAT CGACGGCTTC 
AGCCTGTCGC TGAACGGTGG CGGCCTGGCG GCAGGCGACA GCTTCAAGGT TATCCCTACG 
CGCGCTGCGG CCGGCAGCAT CACCACCACC CTGACCGATG CCAACAAGCT GGCCTTCGCC 
GGGCCCATCA GCGCCACCTC GGGCAGCGGC AACAGCGGCA CGGGCACCAT CACCCAGCCG 
ACCCTGGGCG AATCGCTGGA CATCTACGGC GGTGCCGACA CCGCGCTGAT CCAGCAGTCG 
ATTCGCGACT CGATGCCGGT GCGCGTGGTG TTCGATGCTG CCAGCGGTGG TTCTCAAGGC 
TACAAGTTGT TCGATGCCAA GGGCACCCAG ATCGGCACTG GCAGCGTGGT GCCGGGTACG 
GACAACAAAC TGTCGATTGC CGTGCCGATG CTCGATGCGG CCGGAAACCC AATCAAGGAT 
GCCAGCGGCA ACCCGCGTAC CTTCAGCGTC GAGACCACTA TCGGCGGCAG CCCGGCAGCC 
AATGACAGCT TTACCCTGTC GTTCAATGCC GACGGCAAGG CCGACAACCG TAACGCCACG 
GCGCTGCTGG GCTTGCAGAC CAAGTCGACG GTCAACACCG GTTCTGGCGG CGGCACCAGC 
TTCACCTCGG CTTATGCTTC GCTGGTCGAG CGCGTAGGTG CCAAGGCCAA CCAGGCGACC 
ATCGACACCA CGGCGACCGA GGCGGTGCTC AAGTCCGCCA GTGAGAGTCG CAGTGCGGTG 
TCTGGGGTCA ACCTGGATGA CGAAGCGGCC AGCCTGGTCA AGTTCCAGCA CTACTACACG 
GCGTCGTCGC AGATCATCAA GGCGGCGCAA GAAACCTTCA GCACCCTGAT CAATGCTTTG 
TAA 

 

Protein sequence

MSSLISIGLS GLSASQAALS VTSNNIANAA TSGYSRQQTI QAAGASHNIG AGFLGTGTTL 
ADVRRIYSSY LDNQLQTATS LQADSVAFQD QITSIDKLLA DRDTGISSVL TAFFSALQTA 
AAKPGDVASR QLLLTQAQTL SNRFNAVSTQ LTQQNATINS QLDTMAGQVN KLTASIAEYN 
KQIAAASGTG NTPNSLLDAR SEAVRQLNEL VGVTVQERDG NYDVYLGSGQ SLVTGNKANT 
LSVEPGAADK SQASLRINYE SFSSDVTSVV TGGAIGGLLR YRQDVLTPSM NELGRVALVV 
ADSINSQLGQ GLDANGQFGS SLFSSINSAT ALAQRSLASS NNSSGSGNLD VTIANSGALT 
TYDYEVKFTS ANQYSVRRSD GTDMGSFDLN ANPAPVIDGF SLSLNGGGLA AGDSFKVIPT 
RAAAGSITTT LTDANKLAFA GPISATSGSG NSGTGTITQP TLGESLDIYG GADTALIQQS 
IRDSMPVRVV FDAASGGSQG YKLFDAKGTQ IGTGSVVPGT DNKLSIAVPM LDAAGNPIKD 
ASGNPRTFSV ETTIGGSPAA NDSFTLSFNA DGKADNRNAT ALLGLQTKST VNTGSGGGTS 
FTSAYASLVE RVGAKANQAT IDTTATEAVL KSASESRSAV SGVNLDDEAA SLVKFQHYYT 
ASSQIIKAAQ ETFSTLINAL