Gene PputGB1_3941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3941 
SymbolflgL 
ID5871735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4385906 
End bp4387468 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content61% 
IMG OID641549063 
Productflagellar hook-associated protein FlgL 
Protein accessionYP_001670167 
Protein GI167034936 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID[TIGR02550] flagellar hook-associated protein 3 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.186089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTATTT CCACTGCTCA GTTCTATGAG GCCAGCGCCA GTAGCTACTC CAAGAACTTC 
TCCAGCATGA ACAAGACCAA CGATCAGATA ACGTCGGGTA TCCGTATCCA GACCGCCGCC
GATGACCCGG TCGGTGCTGC GCGCCTGCTG CTGCTGCAAC AGCAGCAGGC GCTGTTGGAC
CAGTACAGCG GCAACATCAA TACCGTCAGC AATTCGCTGC TGCAGGAGGA GAGCGTGCTC
TCCACCATCA ACGACGCCAT GCAGCGCGCC AGCGAGCTGG CGATTCGCGC CGGTGGCGCT
GGGGTTACCG ACTCTGATCG CACAGCCATC AGCACCGAGC TGAAAGAGAT CGAGGCCAAT
ATCTTCGGTT TGCTCAACTC GCGCGATGCC AACGGCGACT ACATGTTTGG CGGCTCCAAA
AGCACTACGC CGCCCTATGT GCGCAATTCC GATGGCACCT ACAGCTACCA CGGCGACCAG
ACCCAGCTGA GCTTGCAGGT GTCCGATACC CTGAACCTGG CTACCAACGA CACGGGTTTC
AGCATCTTCG ACTCGGCCAG CAACAAGAGC CGCACCCAGT CGACCCTGCT GGTGCCTGCC
ACCGACGATG GCGTGGTCGG GGTGTCGTCA GGCCTGATGA CCTCGAGCAC CAGTTACAAC
AACAGCTTCA CGGCAGGCCA GCCATACAAG CTGACCTTCA CCAGCGCAAC CCAATACACC
ATCACCGATG CCAATGGCCG GGACGTTACG TCTGAAACCC CTACCAACGG TACATTCGAC
AGCAAGACGG AAGGGGCCAA CCGCATTGCC CTGCGTGGCG TGGAGTTCGA AATCACCGTT
ACCCTGGAAG AGGGCGCCGA TGCCGATGCG GCGGTGGCAG GGCGCGAGTT TTCCCTGGAG
GCACGCCCAG ACTCGTTCAA TGCCACGCGT AATGGCAACA ACACGTCCAG TGCCCAGATC
ACCAGCAGCA GCGTGACCGA CGAAGCCGCC TATCGCAGCA CCTTCCCCAG CAATGGTGCG
GTGATCAAGT TCACAGGTCC TGGCGCTTAC GAGCTCTATG CCCAGCCGCT GACGGCCGAT
AGCAAGGCGA TAGCCACGGG TACCTTTACC GCGCCGTCGT TGACCGTGGC CGGGGTGACT
TACCAGGTGG CCGGTTCGCC GGAGGCGGGT GACCAGTTCG CGGTCACTGC CAATACCCAC
CAGAACCAGA ACGTGCTGGA AACCATCAGC CAGCTGCGTG CTGCGCTGGA CACGCCGGTG
ACCGGTGCTG GCTCGGCCAA TGCGTTGAAG GACGCGGCAG CTTCGGCCAT CGCCAACCTG
GCCAGCGCCC GTGAGCAGGT GGACATTACC CGGGGTTCGA TCGGTGCCCG TGGCAACTCG
CTGGAGATCC AGCGCCAGGA GAACACCAGC CTGGGCCTGG CCAACAAGAC CACCCAGAAC
GCCATCGGCA ACACCGACAT GTCGCAGGCG GCCATCACCC TGACCTTGCA ACAGGCCATG
CTGGAGGCCT CGCAGCTGGC TTTCTCGCGT ATTTCCCAGC TGAGCCTGTT CAACAAGCTT
TAA
 
Protein sequence
MRISTAQFYE ASASSYSKNF SSMNKTNDQI TSGIRIQTAA DDPVGAARLL LLQQQQALLD 
QYSGNINTVS NSLLQEESVL STINDAMQRA SELAIRAGGA GVTDSDRTAI STELKEIEAN
IFGLLNSRDA NGDYMFGGSK STTPPYVRNS DGTYSYHGDQ TQLSLQVSDT LNLATNDTGF
SIFDSASNKS RTQSTLLVPA TDDGVVGVSS GLMTSSTSYN NSFTAGQPYK LTFTSATQYT
ITDANGRDVT SETPTNGTFD SKTEGANRIA LRGVEFEITV TLEEGADADA AVAGREFSLE
ARPDSFNATR NGNNTSSAQI TSSSVTDEAA YRSTFPSNGA VIKFTGPGAY ELYAQPLTAD
SKAIATGTFT APSLTVAGVT YQVAGSPEAG DQFAVTANTH QNQNVLETIS QLRAALDTPV
TGAGSANALK DAAASAIANL ASAREQVDIT RGSIGARGNS LEIQRQENTS LGLANKTTQN
AIGNTDMSQA AITLTLQQAM LEASQLAFSR ISQLSLFNKL