Gene PputGB1_3936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3936 
SymbolfliS 
ID5871730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4380415 
End bp4380816 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content57% 
IMG OID641549058 
Productflagellar protein FliS 
Protein accessionYP_001670162 
Protein GI167034931 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1516] Flagellin-specific chaperone FliS 
TIGRFAM ID[TIGR00208] flagellar biosynthetic protein FliS 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCCA TGAGAGCCCT TCGTCAGTAC CAGAAGGTCA ATTCCCATGC CCAGATTTCC 
GAAGCCACAC CCCATCGCCT GGTGCAGATG CTGATGGAAG GCGGCCTCGA TCGCATGGCG
CAGGCCAAGG GTGCCATGGC GCGTGGCGAC ATTGCGGAAA AGGGCCTGAT GCTCGGCAAG
GCGATCGACA TCATCATTGG TCTGCGCGAT GGCCTGCAGC CTGAAAAGAG TGAAAACCCC
GAGTACGTTG AAAAACTCGA CGCCCTCTAC GTTTACATGA CCAACCGCCT GATGCAGGCC
AACGTGGACA ACGATGCCGG CATTATCGAC GAAGTTGCCC AGCTGCTGAT TACCGTGAAA
AGTGGTTGGG ATGGCATTGC CGATGCTCAG CCTGCCAGCT GA
 
Protein sequence
MNPMRALRQY QKVNSHAQIS EATPHRLVQM LMEGGLDRMA QAKGAMARGD IAEKGLMLGK 
AIDIIIGLRD GLQPEKSENP EYVEKLDALY VYMTNRLMQA NVDNDAGIID EVAQLLITVK
SGWDGIADAQ PAS