| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3915 |
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| Symbol | fliR |
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| ID | 5871709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4361560 |
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| End bp | 4362336 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641549037 |
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| Product | flagellar biosynthesis protein FliR |
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| Protein accession | YP_001670141 |
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| Protein GI | 167034910 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.834588 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGGAAC TGACCGATAC GCAGATCGGC ACCTGGGTCG CCACCTTCAT CCTGCCGTTG
TTCAGGGTGA CCGCGGTGCT GATGACCATG CCGATCTTCG GTACTCGCAT GTTACCTGCG
CGGGTACGCC TGTACGTGGC GGTGGCGATT ACCGTGGTGA TCGTGCCGGC GCTGCCGCCG
CTGCCTGAGT TCGACCCGCT GAGCCTGCGC GGTTTGTTGC TGTGCGCCGA GCAGATCATC
GTCGGCGCGC TGTTCGGCCT GGCCTTGCAG CTGCTGTTTC AGGCCTTCGT GATTGCCGGG
CAGATCGTCG CGGTGCAGAT GGGTATGGCC TTCGCCTCGA TGGTCGACCC TGCCAACGGC
GTCAACGTCA CGGTGATCAG CCAGTTCATG ACCATGCTGG TGAGCGTGCT GTTCCTGTTG
ATGAACGGCC ACCTGGTGGT TTTCGAGGTG CTGACCGAGA GCTTTACCAC GTTGCCGGTG
GGCAGCGCGC TGGTGGTCAA CCACTTCTGG GAGCTGGCCG GGCGCATGGG TTGGGTGTTT
GCCGCCGGCC TGCTGCTGAT TCTGCCGGTG ATCGCCGCGT TGCTGGTGGT GAACATCGCC
TTTGGCGTGA TGACCCGTGC CGCGCCGCAG TTGAATATCT TCTCCATCGG TTTCCCGCTT
ACCCTGGTGC TGGGTATGTT CATCTTCTGG GTAGGCCTGG CCGATGTGCT GTCCCACTAT
CAGGCATTGG CCAGCGAGAC GCTGCAATGG CTGCGTGAAC TGGCGAGGGC GCGCTGA
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| Protein sequence | MLELTDTQIG TWVATFILPL FRVTAVLMTM PIFGTRMLPA RVRLYVAVAI TVVIVPALPP
LPEFDPLSLR GLLLCAEQII VGALFGLALQ LLFQAFVIAG QIVAVQMGMA FASMVDPANG
VNVTVISQFM TMLVSVLFLL MNGHLVVFEV LTESFTTLPV GSALVVNHFW ELAGRMGWVF
AAGLLLILPV IAALLVVNIA FGVMTRAAPQ LNIFSIGFPL TLVLGMFIFW VGLADVLSHY
QALASETLQW LRELARAR
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