Gene PputGB1_3910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3910 
SymbolfliA 
ID5871704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4355161 
End bp4355901 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content63% 
IMG OID641549032 
Productflagellar biosynthesis sigma factor 
Protein accessionYP_001670136 
Protein GI167034905 
COG category[K] Transcription 
COG ID[COG1191] DNA-directed RNA polymerase specialized sigma subunit 
TIGRFAM ID[TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCA GCGGCTTCAA GATGTACAGC CGGGCGGCGA AAGACGCCCA GTACGAGCTG 
ATCGAACGCT ACGCCCCGCT GGTCAAGCGC ATCGCTTACC ACTTGTTGGC GCGCTTGCCG
GCCAACGTCC AGGTCGAGGA CCTGATCCAG GCCGGCATGA TCGGCCTGCT GGAAGTGGCC
AACAAGTACG ACGCCAGCAA GGGCGCCAGC TTTGAAACCT ACGCCGGCAT CCGCATCCGC
GGGGCCATGC TGGACGAAGT GCGCAAAGGC GATTGGGCGC CGCGTTCGGT ACACCGCAAC
ACTCGTATGG TCAGTGACGC AATGCGTGCG GTTGAGGCTA GAACTGGCCG TGACGCTAAA
GATCATGAAG TTGCTGCCGA ACTCCAATTG AGTCTCGATG ATTACTACGG GATCTTGAAC
GATACCCTGG GCAGCCGCCT GTTCAGCTTC GACGACCTGT TGCAGGACGG CGAGCACGAA
GGGCTGCATG AGGATGGCGC CAGTGGCCAG GTCGAACCTG CGCGTGGCCT GGAAGACGAG
CGCTTCCAGG TTGCCCTGAC CGAGGCGATC GCCAACCTGC CGGAGCGTGA GCGCCTGGTG
CTGGCGCTGT ACTACGACGA AGAGCTGAAC CTCAAGGAAA TCGGCGAGGT ACTGGGTGTC
AGCGAGTCGC GGGTCAGCCA GTTGCACAGC CAGTGTGCCG CGCGCCTGCG CAGCCGCCTG
GGGGAATGGC GGGCACGTTG A
 
Protein sequence
MNASGFKMYS RAAKDAQYEL IERYAPLVKR IAYHLLARLP ANVQVEDLIQ AGMIGLLEVA 
NKYDASKGAS FETYAGIRIR GAMLDEVRKG DWAPRSVHRN TRMVSDAMRA VEARTGRDAK
DHEVAAELQL SLDDYYGILN DTLGSRLFSF DDLLQDGEHE GLHEDGASGQ VEPARGLEDE
RFQVALTEAI ANLPERERLV LALYYDEELN LKEIGEVLGV SESRVSQLHS QCAARLRSRL
GEWRAR