| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3894 |
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| Symbol | |
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| ID | 5871688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4339090 |
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| End bp | 4339857 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641549016 |
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| Product | heme exporter protein CcmC |
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| Protein accession | YP_001670120 |
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| Protein GI | 167034889 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01191] heme exporter protein CcmC |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00141709 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATAA GCTGGACGTG GTTCCACAAG CTGGGCTCCC CGAAATGGTT CTATGCCATC
AGCGGCCGCA TGCTGCCATG GCTGGCCGGC GCTGCCGTGC TCCTGCTGCT GGTCGGTATC
ACCTGGGGCC TGGCCTTCGC TCCCCAGGAC TACCAGCAAG GCAACAGCTT CCGCATCATC
TATATCCACG TGCCGGCGGC GATGCTGGCA CAGTCCTGCT ACGTGCTGCT GGCAGTGGCC
GGGGTGGTGG GGCTGGTGTG GAAGATGAAA CTGGCCGACG TCGCCCTGCA ATGCGCCGCG
CCCATCGGCG CCTGGATGAC CGCCGTGGCG CTGGTGACCG GCGCCATCTG GGGCAAGCCG
ACCTGGGGCA GCTGGTGGGT GTGGGATGCC CGCCTTACGT CCATGCTCAT CCTGCTGTTC
CTGTACTTCG GCATTATTGC GCTGGGCCAG GCGATCAGTA ATCGTGACAG TGCGGCCAAG
GCCTGCGCGG TGCTGGCGAT CGTCGGCGTG GTGAACATCC CGATCATCAA GTATTCGGTG
GAGTGGTGGA ACACCCTGCA CCAGGGCGCC ACCTTCACCC TCACCGAAAA ACCGGCGATG
CCTGCAGAAA TGTGGCTGCC GCTGCTGTGC ACGGCGCTGG GCTTCTATTG CTTCTTCGGC
GCCGTGCTGT TGCTGCGCAT GCGCCTTGAA GTGCTCAAGC GCGAGGCACG CGCCAGTTGG
GTCAAGGATG AAGTGTTGAA CAGCCTGGGG CGGAGGGCCG CACAATGA
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| Protein sequence | MKISWTWFHK LGSPKWFYAI SGRMLPWLAG AAVLLLLVGI TWGLAFAPQD YQQGNSFRII
YIHVPAAMLA QSCYVLLAVA GVVGLVWKMK LADVALQCAA PIGAWMTAVA LVTGAIWGKP
TWGSWWVWDA RLTSMLILLF LYFGIIALGQ AISNRDSAAK ACAVLAIVGV VNIPIIKYSV
EWWNTLHQGA TFTLTEKPAM PAEMWLPLLC TALGFYCFFG AVLLLRMRLE VLKREARASW
VKDEVLNSLG RRAAQ
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