| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3856 |
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| Symbol | |
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| ID | 5871650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4301002 |
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| End bp | 4301784 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641548978 |
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| Product | hypothetical protein |
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| Protein accession | YP_001670082 |
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| Protein GI | 167034851 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3248] Nucleoside-binding outer membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00178481 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.564772 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTACCA TCAACAGCCT GATCCTTGCC GGCGGCCTGC TGGCCTGTGG CACCACCTTC
GGCGGCGACC TGCTGCAATG GCAGAACAAC AGCCTGACCT ACCTGTGGGG CAAGAACTTC
AAGGTCAACC CCGAAACCCA GCAAACCTTC ACCTTCGAGC ACGCCGACGC GTGGAAGTAC
GGCGACAACT TCTTCTTCGT CGACAAGATC TTCTACCAGG GCAAGAAGGA CGCCAACAAC
GGGCCCAACA CCTACTACGG CGAGTTCAGC CCACGCCTGT CGTTCGGCAA GATCTTCGAC
CAGAAGCTGG AGTTCGGCCC GGTCAAGGAC GTGCTGCTGG CCATGACCTA CGAGTTTGGC
GAGGGTGACA CCGAGTCGTA CCTGATCGGC CCAGGCTTCG ACCTGGCCAT CCCGGGCTTC
GATTACTTCC AGCTCAACTT CTACAACCGC ACCACCGACG GCAGCCGCGC CGGCGACAAC
GTATGGCAGA TCACCCCGGT ATGGTCGTAC ACCATCCCGG TCGGCGATTC CGACGTGCTG
ATCGACGGCT TCATGGACTG GGTGGTGGAC AACGACGAGA ACCGCCACGG CACCTACCAG
GCCAACCTGC ACTTCAACCC ACAGATCAAG TACGACCTGG GCAAGGCGTT GCACCTGGGC
GAGAAGCAGC TGTACGTGGG TGTCGAGTAC GACTACTGGA AGAACAAATA CGGTATCAAG
GACAGCGATG CCTTCACTAC CGACCAGAAC ACCATGAGTT TCCTGGTAAA AGTGCACTTC
TGA
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| Protein sequence | MRTINSLILA GGLLACGTTF GGDLLQWQNN SLTYLWGKNF KVNPETQQTF TFEHADAWKY
GDNFFFVDKI FYQGKKDANN GPNTYYGEFS PRLSFGKIFD QKLEFGPVKD VLLAMTYEFG
EGDTESYLIG PGFDLAIPGF DYFQLNFYNR TTDGSRAGDN VWQITPVWSY TIPVGDSDVL
IDGFMDWVVD NDENRHGTYQ ANLHFNPQIK YDLGKALHLG EKQLYVGVEY DYWKNKYGIK
DSDAFTTDQN TMSFLVKVHF
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