Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3842 |
Symbol | |
ID | 5871636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 4284229 |
End bp | 4285683 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641548964 |
Product | xanthine dehydrogenase, small subunit |
Protein accession | YP_001670068 |
Protein GI | 167034837 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG4630] Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A |
TIGRFAM ID | [TIGR02963] xanthine dehydrogenase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.977655 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.775119 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCCAGT TTCTCGTCAA CCAGGAGCTG CGTAGTGAGC ACGCCCTGGA CCCGAACATG ACGGTGCTGC AGTACCTGCG CGAGCACCTG GGCAAACCCG GTACCAAGGA GGGCTGCGCC AGTGGTGACT GCGGCGCCTG CACCGTGGTA GTCGGCGAAC TGACCCAGGA CGAACAAGGT AACGACAGCC TGCGCTACCG CAGCCTCAAC TCGTGCCTGA CGTTCGTCTC GTCGCTGCAC GGCAAGCAGC TGATCAGCGT CGAAGGGCTC AAGCACCAAG GCCAGCTGCA CAGCGTGCAA CAGGCCATGG CCGATTGCCA CGGCTCGCAA TGCGGCTTCT GCACCCCCGG CTTCGTCATG TCGCTGTTCG CCCTGCAAAA GAACAGCAGC GGCCCCGACC TGCACCAGGC CCAGGAAGCC CTGGCCGGCA ACCTGTGCCG CTGCACCGGC TACCGGCCGA TCCTCGACGC CGCCGAGCAG AGCTGCCGCC AGCCCTGCCG CGACCAGTTC GATGCCCAGC AGGCGCAAAC CATCAGCCGC CTCAAGGCCA TTACGCCAAC CCAGACCGGC GAGCTGAACA GCGGTGACAA GCGCTGCCTG GTGCCGCTGA CCGTAGCCGA CCTGGCCGAC CTGTACAGCT CGCACCCCGA AGCCCGCCTG CTGGCCGGTG GTACCGACCT GGCGCTGGAA GTGACCCAGT TTCACAAGAC CTTGCCCGTG ATGATCTATG TCGGTCACGT GGCCGAGCTC AAGCGCATCG AGAAAACCGC CAGCCACCTG GAAATCGGCG CCGCCACCCC GCTCACCGAC TGCTACGGCG CGCTGAACGA CGAATACCCC GACTTTGGCG CCCTGCTGCA CCGCTTCGCC TCGCTGCAGA TCCGCAACCA GGGCACGCTG GGCGGCAACA TCGGCAACGC CTCGCCCATC GGCGACTCGC CTCCCCTGCT GATTGCCCTG GACGCGCAGG TGGTCCTGCG CCAAGGCGAG CGCCAGCGGG TGATGCCACT GGAAGACTAC TTCATCGACT ACCGCATCAC CGCCCGCCAG GACAGCGAGT TCATCGAGAA GATCATCGTG CCGCGCGCCA CCCGCGACTG GGCGTTCCGC GCCTACAAGG TGTCCAAGCG GCTGGACGAT GACATCTCCG CCGTGTGCGC GGCATTTAAC CTGAGCATCG AAAACGGCGT GGTCAGCGGC GTGCGCATCG CCTTCGGCGG CATGGCAGCG ATCCCCAAGC GCGCCCGCGC CTGCGAGGCG GCGCTGCGTG GCAAACCGTG GGACCAGGCC GCCATCGAGC GCGCCTGCCT AGCCCTGGCC GAAGACTTCA CCCCGCTCAG CGACTTCCGC GCCAGCAAGG AATACCGCCT GTTGACTGCG CAAAACCTGT TGCGCAAGTA CTTCATCGAA CAGCAAACGC CGTACATCGA AACCCGGGTG ACCGCTTATG TCTAA
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Protein sequence | MIQFLVNQEL RSEHALDPNM TVLQYLREHL GKPGTKEGCA SGDCGACTVV VGELTQDEQG NDSLRYRSLN SCLTFVSSLH GKQLISVEGL KHQGQLHSVQ QAMADCHGSQ CGFCTPGFVM SLFALQKNSS GPDLHQAQEA LAGNLCRCTG YRPILDAAEQ SCRQPCRDQF DAQQAQTISR LKAITPTQTG ELNSGDKRCL VPLTVADLAD LYSSHPEARL LAGGTDLALE VTQFHKTLPV MIYVGHVAEL KRIEKTASHL EIGAATPLTD CYGALNDEYP DFGALLHRFA SLQIRNQGTL GGNIGNASPI GDSPPLLIAL DAQVVLRQGE RQRVMPLEDY FIDYRITARQ DSEFIEKIIV PRATRDWAFR AYKVSKRLDD DISAVCAAFN LSIENGVVSG VRIAFGGMAA IPKRARACEA ALRGKPWDQA AIERACLALA EDFTPLSDFR ASKEYRLLTA QNLLRKYFIE QQTPYIETRV TAYV
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