Gene PputGB1_3842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3842 
Symbol 
ID5871636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4284229 
End bp4285683 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content66% 
IMG OID641548964 
Productxanthine dehydrogenase, small subunit 
Protein accessionYP_001670068 
Protein GI167034837 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG4630] Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A 
TIGRFAM ID[TIGR02963] xanthine dehydrogenase, small subunit 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.977655 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.775119 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCAGT TTCTCGTCAA CCAGGAGCTG CGTAGTGAGC ACGCCCTGGA CCCGAACATG 
ACGGTGCTGC AGTACCTGCG CGAGCACCTG GGCAAACCCG GTACCAAGGA GGGCTGCGCC
AGTGGTGACT GCGGCGCCTG CACCGTGGTA GTCGGCGAAC TGACCCAGGA CGAACAAGGT
AACGACAGCC TGCGCTACCG CAGCCTCAAC TCGTGCCTGA CGTTCGTCTC GTCGCTGCAC
GGCAAGCAGC TGATCAGCGT CGAAGGGCTC AAGCACCAAG GCCAGCTGCA CAGCGTGCAA
CAGGCCATGG CCGATTGCCA CGGCTCGCAA TGCGGCTTCT GCACCCCCGG CTTCGTCATG
TCGCTGTTCG CCCTGCAAAA GAACAGCAGC GGCCCCGACC TGCACCAGGC CCAGGAAGCC
CTGGCCGGCA ACCTGTGCCG CTGCACCGGC TACCGGCCGA TCCTCGACGC CGCCGAGCAG
AGCTGCCGCC AGCCCTGCCG CGACCAGTTC GATGCCCAGC AGGCGCAAAC CATCAGCCGC
CTCAAGGCCA TTACGCCAAC CCAGACCGGC GAGCTGAACA GCGGTGACAA GCGCTGCCTG
GTGCCGCTGA CCGTAGCCGA CCTGGCCGAC CTGTACAGCT CGCACCCCGA AGCCCGCCTG
CTGGCCGGTG GTACCGACCT GGCGCTGGAA GTGACCCAGT TTCACAAGAC CTTGCCCGTG
ATGATCTATG TCGGTCACGT GGCCGAGCTC AAGCGCATCG AGAAAACCGC CAGCCACCTG
GAAATCGGCG CCGCCACCCC GCTCACCGAC TGCTACGGCG CGCTGAACGA CGAATACCCC
GACTTTGGCG CCCTGCTGCA CCGCTTCGCC TCGCTGCAGA TCCGCAACCA GGGCACGCTG
GGCGGCAACA TCGGCAACGC CTCGCCCATC GGCGACTCGC CTCCCCTGCT GATTGCCCTG
GACGCGCAGG TGGTCCTGCG CCAAGGCGAG CGCCAGCGGG TGATGCCACT GGAAGACTAC
TTCATCGACT ACCGCATCAC CGCCCGCCAG GACAGCGAGT TCATCGAGAA GATCATCGTG
CCGCGCGCCA CCCGCGACTG GGCGTTCCGC GCCTACAAGG TGTCCAAGCG GCTGGACGAT
GACATCTCCG CCGTGTGCGC GGCATTTAAC CTGAGCATCG AAAACGGCGT GGTCAGCGGC
GTGCGCATCG CCTTCGGCGG CATGGCAGCG ATCCCCAAGC GCGCCCGCGC CTGCGAGGCG
GCGCTGCGTG GCAAACCGTG GGACCAGGCC GCCATCGAGC GCGCCTGCCT AGCCCTGGCC
GAAGACTTCA CCCCGCTCAG CGACTTCCGC GCCAGCAAGG AATACCGCCT GTTGACTGCG
CAAAACCTGT TGCGCAAGTA CTTCATCGAA CAGCAAACGC CGTACATCGA AACCCGGGTG
ACCGCTTATG TCTAA
 
Protein sequence
MIQFLVNQEL RSEHALDPNM TVLQYLREHL GKPGTKEGCA SGDCGACTVV VGELTQDEQG 
NDSLRYRSLN SCLTFVSSLH GKQLISVEGL KHQGQLHSVQ QAMADCHGSQ CGFCTPGFVM
SLFALQKNSS GPDLHQAQEA LAGNLCRCTG YRPILDAAEQ SCRQPCRDQF DAQQAQTISR
LKAITPTQTG ELNSGDKRCL VPLTVADLAD LYSSHPEARL LAGGTDLALE VTQFHKTLPV
MIYVGHVAEL KRIEKTASHL EIGAATPLTD CYGALNDEYP DFGALLHRFA SLQIRNQGTL
GGNIGNASPI GDSPPLLIAL DAQVVLRQGE RQRVMPLEDY FIDYRITARQ DSEFIEKIIV
PRATRDWAFR AYKVSKRLDD DISAVCAAFN LSIENGVVSG VRIAFGGMAA IPKRARACEA
ALRGKPWDQA AIERACLALA EDFTPLSDFR ASKEYRLLTA QNLLRKYFIE QQTPYIETRV
TAYV