| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3824 |
|---|
| Symbol | |
|---|
| ID | 5871617 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 4262177 |
|---|
| End bp | 4263595 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641548946 |
|---|
| Product | cytochrome c oxidase accessory protein CcoG |
|---|
| Protein accession | YP_001670050 |
|---|
| Protein GI | 167034819 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0348] Polyferredoxin |
|---|
| TIGRFAM ID | [TIGR02745] cytochrome c oxidase accessory protein FixG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.85554 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAGCA AGCAAATTCC GGTACATGAT GTAACCCCGC CTGCCAACAA AGGGAAGGAT
TCCGTCGACC TTTACGCCTC CCGCGAAAAA ATCTACACCC GCGCCTTTAC CGGCTTGTTC
CGTCGCCTGC GCATGGTCGG CGGTGCTGCA CTGTTTCTGC TGTACTTCGG CACCGTGTGG
CTGAACTGGG GCGGCCACCA GGCCGTGTGG TGGAACCTGC CCGAACGCAA GTTCTACATC
TTCGGCGCCA CTATCTGGCC GCAGGACTTC ATCCTGCTGT CAGGCATCCT GATCGTCGCC
GCCTTCGGCC TGTTCTTCGT CACCGTGTAC GCAGGCCGCG TCTGGTGCGG CTACACCTGC
CCGCAAAGCG TGTGGACGTG GATTTTCATG TGGTGCGAAA AGGTCACCGA GGGCGACCGC
AACCAGCGCA TGAAGCTCGA CAAAGCCCCC ATGAGCGGCA ACAAGTTCCT GCGCAAGTTC
GCCAAGCACA GCCTTTGGCT GCTGATCGGT TTCGTCACCG GCATGACCTT CGTCGGCTAC
TTCTCGCCCA TCCGTGAACT GGTGATCGAG TTCTTCACTG GCCAGGCCGA TGGCTGGGCG
TATTTCTGGG TCGGTTTCTT CACCCTTGCC ACCTACGGCA ATGCCGGCTG GCTGCGCGAG
CAGGTGTGCG TGTACATGTG CCCCTACGCA CGCTTCCAGA GCGTGATGTT CGACAAGGAC
ACGCTGATCG TGTCCTACGA CCCGCGCCGT GGTGAAACCC GTGGGCCGCG TAAAAAAGAC
GCCGACTACA AGGCCCAAGG CCTGGGCGAC TGCATCGATT GCACCATGTG CGTACAAGTC
TGCCCCACCG GCATCGACAT CCGTGATGGC CTGCAGATCG AGTGCATCGG CTGCGCCGCG
TGCATCGACG CCTGCGACAG CATCATGGAG AAGATGAATT ACCCCAAAGG GCTGATCAGC
TATACCACCG AACACAACTT GTCCGGGCAG AAGACTCACA TGTTGCGCCC GCGCCTGATT
GGTTATGCCG TGGTGCTGCT GGTGATGATC ATCGGCCTGG CCACCGCCTT CGCCACCCGT
TCGCTGGTTG GTTTCGACGT CAGCAAAGAC CGCGTACTGT ACCGCGAAAA CGCCCAGGGC
CGGATCGAGA ACGTGTACAG CCTGAAGGTG ATGAACAAGG ACCAGCGCGA CCACGTCTAC
GTACTGGACG CTGCCGGCCT GCCGGACCTC AAGCTCGAAG GCCAGCGCGA AATCCGCGTG
GCCGCTGGTG ATATCGTCAG CCTGCCGGTG CAGCTGTCGA TCGCCCCCGA GAAGCTGCCC
TCGACCACCA ACGAAATCAC CTTCATCCTC AAGAGCGCCG ACGACAGCGA CGCCCAGGTT
GAAGCCAAGA GCCGCTTCAT CGGCCCACAG ATCCGCTAA
|
|---|
| Protein sequence | MMSKQIPVHD VTPPANKGKD SVDLYASREK IYTRAFTGLF RRLRMVGGAA LFLLYFGTVW
LNWGGHQAVW WNLPERKFYI FGATIWPQDF ILLSGILIVA AFGLFFVTVY AGRVWCGYTC
PQSVWTWIFM WCEKVTEGDR NQRMKLDKAP MSGNKFLRKF AKHSLWLLIG FVTGMTFVGY
FSPIRELVIE FFTGQADGWA YFWVGFFTLA TYGNAGWLRE QVCVYMCPYA RFQSVMFDKD
TLIVSYDPRR GETRGPRKKD ADYKAQGLGD CIDCTMCVQV CPTGIDIRDG LQIECIGCAA
CIDACDSIME KMNYPKGLIS YTTEHNLSGQ KTHMLRPRLI GYAVVLLVMI IGLATAFATR
SLVGFDVSKD RVLYRENAQG RIENVYSLKV MNKDQRDHVY VLDAAGLPDL KLEGQREIRV
AAGDIVSLPV QLSIAPEKLP STTNEITFIL KSADDSDAQV EAKSRFIGPQ IR
|
|---|
| |