Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3820 |
Symbol | |
ID | 5871613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 4258695 |
End bp | 4260137 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641548942 |
Product | cbb3-type cytochrome c oxidase subunit I |
Protein accession | YP_001670046 |
Protein GI | 167034815 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACAG CAATCAGTCC GACTGCTTAT AACTATAAGG TCGTCCGCCA GTTCGCCATC ATGACGGTGG TCTGGGGGAT CCTTGGCATG GGCCTCGGCG TCTTCATCGC CTCGCAGCTG GTATGGCCGC AACTGAACCT GGACCTGCCC TGGACCAGCT TCGGCCGCCT GCGCCCGCTG CACACCAACC TGGTGATCTT CGCCTTCGGG GGCTGTGCGC TGTTCGGCAC CAGCTACTAC GTGGTGCAGC GCACCTGCCA GACCCGGCTG ATCTCCGACA GCATGGCCGC CTTCACCTTC TGGGGTTGGC AGGCAGTGAT CGTCGGCGCG CTGATCACCC TGCCGATGGG CTACACCACC ACCAAGGAAT ACGCCGAGCT CGAATGGCCG CTGGCGATCC TGCTGGCCAT CGTCTGGGTA ACCTACGGGT TGGTGTTCTT CGGCACCATC GTCAAGCGCA AGACCAAGCA CATCTACGTC GGCAACTGGT TCTACGGCGC CTTCATCGTG GTCACCGCGA TGCTGCACAT CGTCAACCAC ATCTCGCTGC CGGTGAGCCT GTTCAAGTCG TACTCGGCCT ACGCCGGCGC CACCGACGCA ATGATCCAGT GGTGGTACGG CCACAACGCC GTGGGCTTCT TCCTCACCAC TGGCTTCCTG GGGATGATGT ACTACTTCGT GCCCAAGCAG GCCGAGCGGC CGATCTACTC GTATCGCCTG TCGATCGTGC ACTTCTGGGC GCTGATCACC CTGTACATCT GGGCAGGCCC CCACCACCTG CACTACACCG CCCTGCCTGA CTGGGCGCAG TCGCTGGGCA TGGTGATGTC GATCATCCTG CTGGCGCCAA GCTGGGGTGG CATGATCAAC GGCATGATGA CCCTGTCCGG TGCCTGGCAC AAACTGCGCA CCGACCCGAT CCTGCGCTTC CTGGTGGTTT CGCTGGCGTT CTACGGCATG TCCACCTTCG AAGGCCCGAT GATGGCCATC AAGACCGTGA ACTCGCTGTC GCACTACACC GACTGGACCA TCGGCCACGT CCACGCCGGC GCCCTCGGCT GGGTGGCAAT GATCTCGATC GGCGCCGTGT ACCACATGAT CCCGAAACTC TACGGCCGCG AGCAGATGCA CAGCGTCGGC TTGATCAACG CGCACTTCTG GCTGGCCACC ATCGGCACCG TGCTGTACAT CGCCTCGATG TGGGTCAACG GCATTACCCA AGGCCTGATG TGGCGCGCCA TCAACGATGA CGGCACCCTC ACCTACTCCT TCGTCGAAGC CCTGCAGGCC AGCCACCCTG GCTATATCGT CCGCGCCCTG GGCGGTGCGT TCTTCGCCAG CGGCATGCTG CTGATGGCCT ACAACGTGTT CCGTACCGTA CGTGCCGCCA ACCCGGCACA GGCTGAGGAA GCCGCCAAGA TCGTCGTTGT GGGAGCGCAC TGA
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Protein sequence | MSTAISPTAY NYKVVRQFAI MTVVWGILGM GLGVFIASQL VWPQLNLDLP WTSFGRLRPL HTNLVIFAFG GCALFGTSYY VVQRTCQTRL ISDSMAAFTF WGWQAVIVGA LITLPMGYTT TKEYAELEWP LAILLAIVWV TYGLVFFGTI VKRKTKHIYV GNWFYGAFIV VTAMLHIVNH ISLPVSLFKS YSAYAGATDA MIQWWYGHNA VGFFLTTGFL GMMYYFVPKQ AERPIYSYRL SIVHFWALIT LYIWAGPHHL HYTALPDWAQ SLGMVMSIIL LAPSWGGMIN GMMTLSGAWH KLRTDPILRF LVVSLAFYGM STFEGPMMAI KTVNSLSHYT DWTIGHVHAG ALGWVAMISI GAVYHMIPKL YGREQMHSVG LINAHFWLAT IGTVLYIASM WVNGITQGLM WRAINDDGTL TYSFVEALQA SHPGYIVRAL GGAFFASGML LMAYNVFRTV RAANPAQAEE AAKIVVVGAH
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