| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3816 |
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| Symbol | |
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| ID | 5871609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4255149 |
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| End bp | 4256573 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641548938 |
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| Product | cbb3-type cytochrome c oxidase subunit I |
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| Protein accession | YP_001670042 |
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| Protein GI | 167034811 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
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| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACAA CCAGCAGTAC CGCCTATAAC TACAAGGTGG TCCGCCAATT CGCCATCATG
ACGGTGGTGT GGGGAATCGT CGGGATGGGG CTCGGCGTCT TCATCGCCGC CCAGCTCGCC
TGGCCTTCCC TCAACTTCGA CCTCCCCTGG ACCAGCTTCG GCCGCCTGCG CCCCCTGCAT
ACCAATGCGG TGATCTTCGC GTTCGGCGGC TGTGCGCTGT TTGCCACCTC CTATTATTCG
GTGCAACGCA CCTGCCAGAC CACCCTGTTC GCACCGGGCC TGGCCGCGTT CACCTTCTGG
GGCTGGCAAC TGGTGATCGT GCTGGCGGCC ATCAGCCTGC CGCTTGGCTA CACCAGCTCC
AAGGAATACG CCGAACTGGA ATGGCCGATC GATATCCTGA TCACCATCGT CTGGGTGGGC
TACGCCATCG TGTTCTTCGG CACGCTGATG AAGCGCAACA CCAAGCACAT CTACGTGGGT
AACTGGTTCT TCGGCGCCTT TATCCTCACC GTGGCGCTGC TGCACATCGT CAACAACCTG
GAACTGCCCG TCAGCCTGAC CAAGTCGTAC TCGGTCTACG CCGGCGCCAC CGACGCCATG
GTGCAGTGGT GGTACGGCCA CAACGCGGTG GGCTTCTTCC TGACCGCAGG CTTCCTGGGG
ATGATGTACT ACTACGTGCC CAAACAGGCC GAACGCCCGG TGTATTCCTA TCGCCTGTCG
ATCGTGCACT TCTGGGCCCT GATCACCCTG TACATCTGGG CAGGCCCCCA CCACCTGCAC
TACACCGCCC TGCCCGACTG GGCACAGTCG CTGGGCATGG TGATGTCGCT GATCCTGCTG
GCACCGAGCT GGGGCGGCAT GATCAACGGC ATGATGACCC TGTCGGGCGC CTGGCACAAA
CTGCGCAGCG ACCCGATCCT GCGCTTCCTG GTCGTATCGC TGGCGTTCTA CGGCATGTCC
ACCTTCGAAG GCCCGATGAT GGCCATCAAG ACGGTCAACG CCCTGTCCCA CTACACCGAC
TGGACCATCG GCCACGTGCA CGCTGGCGCC CTCGGCTGGG TCGCCATGAT CTCGATCGGT
GCGCTGTACC ACACCATCCC GAAAGTGTTT GGCAAAGAGC GCATGTACAG CCTCGGCCTG
ATCAACGCGC ACTTCTGGCT GGCCACCATC GGCACCGTGC TGTACATCGC CTCGATGTGG
GTCAACGGCA TCGCCCAGGG CCTGATGTGG CGCGCGGTCA ACAGCGACGG CACGCTCACC
TACTCGTTCG TGGAAACCCT GGTGGCCAGC CACCCAGGCT TCGTCGTGCG CTTCGTCGGC
GGTGCGATCT TCCTCAGCGG CATGTTCCTG ATGGCCTGGA ACACCTGGCG CACCGTGCGT
TCGCCAGCGC TTGACGTCGC CCCTGCGAAC GCCCAGTTGG CTTGA
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| Protein sequence | MNTTSSTAYN YKVVRQFAIM TVVWGIVGMG LGVFIAAQLA WPSLNFDLPW TSFGRLRPLH
TNAVIFAFGG CALFATSYYS VQRTCQTTLF APGLAAFTFW GWQLVIVLAA ISLPLGYTSS
KEYAELEWPI DILITIVWVG YAIVFFGTLM KRNTKHIYVG NWFFGAFILT VALLHIVNNL
ELPVSLTKSY SVYAGATDAM VQWWYGHNAV GFFLTAGFLG MMYYYVPKQA ERPVYSYRLS
IVHFWALITL YIWAGPHHLH YTALPDWAQS LGMVMSLILL APSWGGMING MMTLSGAWHK
LRSDPILRFL VVSLAFYGMS TFEGPMMAIK TVNALSHYTD WTIGHVHAGA LGWVAMISIG
ALYHTIPKVF GKERMYSLGL INAHFWLATI GTVLYIASMW VNGIAQGLMW RAVNSDGTLT
YSFVETLVAS HPGFVVRFVG GAIFLSGMFL MAWNTWRTVR SPALDVAPAN AQLA
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