| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3778 |
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| Symbol | |
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| ID | 5871571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4202311 |
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| End bp | 4203636 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641548900 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001670004 |
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| Protein GI | 167034773 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCCA TCGATACCGC TCGCCCGCCC CGGTTCAGCC GCGGCGACCA TCGGACCCTG
GGCCTGGCGG CGCTGGGCGG CGCGCTGGAA ATCTACGACT TCATCATTTT CGTGTTCTTC
GCGCTGACCC TCAGCCAGCT GTTTTTCCCG CCCGAGATGC CCGAATGGCT GCGGCTGTTG
CAAAGCTTTG GCATCTTCGT CACCGGCTAC CTGGCGCGGC CGCTGGGCGG CATCCTGATG
GCACACTTTG CCGATCATCT GGGGCGCAAG CGGGTCTTCA GCCTGAGTAT CCTGATGATG
GCCCTGCCGT GCCTGCTGAT CGGGGTGATG CCCACCTACG CCGACATCGG TTATGCCGCG
CCGCTGATCC TGCTGGCCCT GCGTATTCTG CAGGGCGCGG CGGTGGGGGG CGAGGTGCCG
AGTGCCTGGA CCTTCGTCGC CGAGCATGCA CCCGCCGGGC GGCGCGGCTA TGCCCTTGGC
TTCCTGCAGG CCGGGCTGAC CTTCGGCTAC CTGTTGGGGG CGCTGACCGC GACCCTGCTG
GCGCAGCTGT TCACCCCGCA GGAAATCCTC GATTACGCCT GGCGTTACCC GTTCCTGCTG
GGTGGGGTAT TTGGCGTGAT CGGCGTATGG CTGCGCCGCT GGCTCAGCGA AACGCCGGTG
TTCCTTGCCC TGCGCGCGCG TCAGGAGCAG CCGGTGAAGT TCCCGCTGCG GCGGGTGCTG
AGCGAGCACC GCCAGGCGTT GATCCCGGCC GCGCTGCTGA CCTGTGTGCT GACCTCGGCG
GTTGTGGTGC TGGTAGTGAT CACGCCGACG GTGATGCAGC AGCGTTTCGG CATGAGTGCC
GGGCACACCT TTGCCTTGAG CAGTGTGGGC ATCGTCTTCC TCAACATCGG CTGCGTGCTG
GCTGGGCTGC TGGTCGACCG TGTGGGCGCC TGGCGTGCGC TGATGCTCTA CAGCCTGCTG
TTGCCGCTGG GTATCGGCGC GCTGTACGCC AGCCTGGTGG GGCAGTGGGG CATGACCTGG
CTGGCCTATG CGCTGGCGGG GTTGAGCTGT GGTGTAGTCG GGGTGGTGCC GTCGGTGATG
GTCGGACTGT TCCCGGCCGA GATCCGTGTG TCGGGCATTT CCTTCACCTA CAACGTGGCC
TATGCGCTTT GGGCCAGCAC CACGCCGCTG GCACTGATTG CGCTGATGCC GTGGAGCCCG
TGGGTGTGTG TCGGGTTTTG TCTGGTCATG GGCGCGGTGG GGCTGCTGAC GGCCTTGTAT
TTCGGGCGCC GTGAGCCCTT GGCGTTTGCG GCGGAGCCGA TGCCAATCAT GTGTGGTGAC
AAATGA
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| Protein sequence | MTAIDTARPP RFSRGDHRTL GLAALGGALE IYDFIIFVFF ALTLSQLFFP PEMPEWLRLL
QSFGIFVTGY LARPLGGILM AHFADHLGRK RVFSLSILMM ALPCLLIGVM PTYADIGYAA
PLILLALRIL QGAAVGGEVP SAWTFVAEHA PAGRRGYALG FLQAGLTFGY LLGALTATLL
AQLFTPQEIL DYAWRYPFLL GGVFGVIGVW LRRWLSETPV FLALRARQEQ PVKFPLRRVL
SEHRQALIPA ALLTCVLTSA VVVLVVITPT VMQQRFGMSA GHTFALSSVG IVFLNIGCVL
AGLLVDRVGA WRALMLYSLL LPLGIGALYA SLVGQWGMTW LAYALAGLSC GVVGVVPSVM
VGLFPAEIRV SGISFTYNVA YALWASTTPL ALIALMPWSP WVCVGFCLVM GAVGLLTALY
FGRREPLAFA AEPMPIMCGD K
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