Gene PputGB1_3758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3758 
Symbol 
ID5871551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4181467 
End bp4182903 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content61% 
IMG OID641548880 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_001669984 
Protein GI167034753 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID[TIGR01350] dihydrolipoamide dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGA AATTCGACGT AGTGGTGATT GGTGCAGGTC CTGGCGGCTA TGTGGCTGCC 
ATCAAGGCTG CCCAACTTGG TCTGAAGACT GCCTGTATCG AGAAGTACAC CGACGCCGAG
GGCAAGCTGG CCCTGGGCGG CACCTGCCTG AACGTAGGTT GCATTCCTTC CAAGGCGCTG
CTGGACAGCT CCTGGAAATA CAAGGAAGCC AAAGAGAGCT TCAACGTCCA CGGTATCTCC
ACTGGCGAAG TGAAGATGGA CGTCGCCGCG ATGGTTGGCC GCAAGGCTGG CATCGTCAAG
AACCTGACCG GTGGCGTTGC CACCCTGTTC AAGGCCAACG GCGTTACTTC GATCCAGGGC
CACGGCAAGC TGCTGGCTGG CAAAAAAGTC GAAGTCACCA AGGCTGACGG CACCACCGAA
GTCATCGAAG CCGAGAACGT GATCCTGGCT TCCGGCTCGC GCCCGATCGA CATTCCACCG
GCCCCGGTCG ACCAGAACGT CATCGTCGAC TCCACCGGCG CCCTGGAATT CCAGACCGTA
CCGAAGCGCC TGGGCGTTAT CGGTGCTGGC GTGATCGGCC TGGAGCTGGG TTCGGTATGG
GCTCGTCTGG GTGCTGAAGT CACTGTCCTG GAAGCCCTGG ACACCTTCCT GATGGCTGCC
GACACCGCTG TGTCGAAAGA AGCCCAGAAG ACCCTGACCA AGCAAGGCCT GGACATCAAG
CTGGGCGCTC GCGTCACCGG CTCGAAAGTC AACGGCAACG AAGTCGAAGT CACCTACACC
AACGCCGAAG GCGAGCAGAA GATCACCTTC GACAAGCTGA TCGTCGCGGT CGGCCGTCGC
CCGGTGACCA CCGATCTGCT GGCTGCCGAC AGCGGCGTGA CCATCGACGA GCGTGGCTAC
ATCTTCGTCG ACGATCACTG TGCCACCAGC GTTCCGGGCG TGTTCGCCAT CGGTGACGTG
GTACGCGGCA TGATGCTGGC CCACAAGGCG TCGGAAGAGG GCATCATGGT GGTCGAGCGC
ATCAAAGGCC ACAAGGCCCA GATGAACTAC GACCTGATCC CGTCGGTTAT CTACACCCAC
CCGGAAATCG CATGGGTCGG CAAGACCGAA CAGGCCTTGA AGGCCGAGGG CGTTGAGGTT
AACGTGGGCA CCTTCCCGTT CGCGGCCAGC GGCCGTGCGA TGGCTGCCAA CGACACCGGT
GGTTTCGTCA AGGTCATCGC CGATGCCAAG ACCGACCGCG TCCTGGGTGT ACACGTGATT
GGCCCATCGG CTGCCGAACT GGTGCAGCAG GGCGCAATCG CAATGGAATT CGGCACCAGT
GCCGAGGATC TGGGCATGAT GGTCTTCAGC CATCCGACCC TGTCCGAAGC GTTGCATGAA
GCAGCGCTGG CAGTGAATGG CGGCGCCATT CACGTGGCCA ACCGTAAGAA GCGTTAA
 
Protein sequence
MTQKFDVVVI GAGPGGYVAA IKAAQLGLKT ACIEKYTDAE GKLALGGTCL NVGCIPSKAL 
LDSSWKYKEA KESFNVHGIS TGEVKMDVAA MVGRKAGIVK NLTGGVATLF KANGVTSIQG
HGKLLAGKKV EVTKADGTTE VIEAENVILA SGSRPIDIPP APVDQNVIVD STGALEFQTV
PKRLGVIGAG VIGLELGSVW ARLGAEVTVL EALDTFLMAA DTAVSKEAQK TLTKQGLDIK
LGARVTGSKV NGNEVEVTYT NAEGEQKITF DKLIVAVGRR PVTTDLLAAD SGVTIDERGY
IFVDDHCATS VPGVFAIGDV VRGMMLAHKA SEEGIMVVER IKGHKAQMNY DLIPSVIYTH
PEIAWVGKTE QALKAEGVEV NVGTFPFAAS GRAMAANDTG GFVKVIADAK TDRVLGVHVI
GPSAAELVQQ GAIAMEFGTS AEDLGMMVFS HPTLSEALHE AALAVNGGAI HVANRKKR