Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3758 |
Symbol | |
ID | 5871551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4181467 |
End bp | 4182903 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641548880 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_001669984 |
Protein GI | 167034753 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAGA AATTCGACGT AGTGGTGATT GGTGCAGGTC CTGGCGGCTA TGTGGCTGCC ATCAAGGCTG CCCAACTTGG TCTGAAGACT GCCTGTATCG AGAAGTACAC CGACGCCGAG GGCAAGCTGG CCCTGGGCGG CACCTGCCTG AACGTAGGTT GCATTCCTTC CAAGGCGCTG CTGGACAGCT CCTGGAAATA CAAGGAAGCC AAAGAGAGCT TCAACGTCCA CGGTATCTCC ACTGGCGAAG TGAAGATGGA CGTCGCCGCG ATGGTTGGCC GCAAGGCTGG CATCGTCAAG AACCTGACCG GTGGCGTTGC CACCCTGTTC AAGGCCAACG GCGTTACTTC GATCCAGGGC CACGGCAAGC TGCTGGCTGG CAAAAAAGTC GAAGTCACCA AGGCTGACGG CACCACCGAA GTCATCGAAG CCGAGAACGT GATCCTGGCT TCCGGCTCGC GCCCGATCGA CATTCCACCG GCCCCGGTCG ACCAGAACGT CATCGTCGAC TCCACCGGCG CCCTGGAATT CCAGACCGTA CCGAAGCGCC TGGGCGTTAT CGGTGCTGGC GTGATCGGCC TGGAGCTGGG TTCGGTATGG GCTCGTCTGG GTGCTGAAGT CACTGTCCTG GAAGCCCTGG ACACCTTCCT GATGGCTGCC GACACCGCTG TGTCGAAAGA AGCCCAGAAG ACCCTGACCA AGCAAGGCCT GGACATCAAG CTGGGCGCTC GCGTCACCGG CTCGAAAGTC AACGGCAACG AAGTCGAAGT CACCTACACC AACGCCGAAG GCGAGCAGAA GATCACCTTC GACAAGCTGA TCGTCGCGGT CGGCCGTCGC CCGGTGACCA CCGATCTGCT GGCTGCCGAC AGCGGCGTGA CCATCGACGA GCGTGGCTAC ATCTTCGTCG ACGATCACTG TGCCACCAGC GTTCCGGGCG TGTTCGCCAT CGGTGACGTG GTACGCGGCA TGATGCTGGC CCACAAGGCG TCGGAAGAGG GCATCATGGT GGTCGAGCGC ATCAAAGGCC ACAAGGCCCA GATGAACTAC GACCTGATCC CGTCGGTTAT CTACACCCAC CCGGAAATCG CATGGGTCGG CAAGACCGAA CAGGCCTTGA AGGCCGAGGG CGTTGAGGTT AACGTGGGCA CCTTCCCGTT CGCGGCCAGC GGCCGTGCGA TGGCTGCCAA CGACACCGGT GGTTTCGTCA AGGTCATCGC CGATGCCAAG ACCGACCGCG TCCTGGGTGT ACACGTGATT GGCCCATCGG CTGCCGAACT GGTGCAGCAG GGCGCAATCG CAATGGAATT CGGCACCAGT GCCGAGGATC TGGGCATGAT GGTCTTCAGC CATCCGACCC TGTCCGAAGC GTTGCATGAA GCAGCGCTGG CAGTGAATGG CGGCGCCATT CACGTGGCCA ACCGTAAGAA GCGTTAA
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Protein sequence | MTQKFDVVVI GAGPGGYVAA IKAAQLGLKT ACIEKYTDAE GKLALGGTCL NVGCIPSKAL LDSSWKYKEA KESFNVHGIS TGEVKMDVAA MVGRKAGIVK NLTGGVATLF KANGVTSIQG HGKLLAGKKV EVTKADGTTE VIEAENVILA SGSRPIDIPP APVDQNVIVD STGALEFQTV PKRLGVIGAG VIGLELGSVW ARLGAEVTVL EALDTFLMAA DTAVSKEAQK TLTKQGLDIK LGARVTGSKV NGNEVEVTYT NAEGEQKITF DKLIVAVGRR PVTTDLLAAD SGVTIDERGY IFVDDHCATS VPGVFAIGDV VRGMMLAHKA SEEGIMVVER IKGHKAQMNY DLIPSVIYTH PEIAWVGKTE QALKAEGVEV NVGTFPFAAS GRAMAANDTG GFVKVIADAK TDRVLGVHVI GPSAAELVQQ GAIAMEFGTS AEDLGMMVFS HPTLSEALHE AALAVNGGAI HVANRKKR
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