Gene PputGB1_3749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3749 
Symbol 
ID5871542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4172350 
End bp4173075 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content63% 
IMG OID641548871 
Productdienelactone hydrolase 
Protein accessionYP_001669975 
Protein GI167034744 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGG TAATCGTCGA ATCGTTGGTT TATCACCTGT CCGGCAAAAC CTATGAAAGC 
CGCCTGGTCT ATGAGCCAGG TGCGCTGCCG AAGCCCGGCC TGGTGATGGC GCCGAACTGG
ATGGGCATTG GTGAAGGCGC CGAGCGTATC GCCAAGGAAG TGGCCGAGAA GGGCTACGTG
GTGTTGATTG CCGACCTGTA CGGTCAATCG GTGCGCCCGT CCAACGCCGA CGAGGCGGGT
GCGGCGATGA TGCCGTTGAA GAATGATCGC AGCGAGCTGC GCAAGCGCAT GCAGGAAGCC
CTGGCGCAGT TGCTGGGGCA GTCGAAGGCG CTACTGGAGC CGGGCAAGGT CGCAACCTTC
GGCTTTTGCT TCGGTGGCTG CTGTGCGCTG GAGCTGGCGC GTACCGGCGC CGACCTGCGT
GCGGCGGTGT CGTTCCACGG CACCCTGGAC ACGCCGAACC CGGAGGATGC CAAGCGCATC
AAGGGCTCGG TGCTGGTGCT GCATGGCGCT GCCGACCCAT TGGTGCCGAA AGAGCAGCTG
CCGGCGTTCG AGGACGAGAT GAACGCCGCC AAGGTGGACT GGCAGTTGCT GAGCTATGGC
GGGGCAGTGC ACTCGTTCAC CGACCCGAAT GCCAATGTGC CGGGTAAGAT GCAGTACGAC
CGCCGTACCT CGGAGCGGGC GTTCCGGTCG ATGCATAACC TGCTGACGGA AGTGTTCCAG
CGTTGA
 
Protein sequence
MSKVIVESLV YHLSGKTYES RLVYEPGALP KPGLVMAPNW MGIGEGAERI AKEVAEKGYV 
VLIADLYGQS VRPSNADEAG AAMMPLKNDR SELRKRMQEA LAQLLGQSKA LLEPGKVATF
GFCFGGCCAL ELARTGADLR AAVSFHGTLD TPNPEDAKRI KGSVLVLHGA ADPLVPKEQL
PAFEDEMNAA KVDWQLLSYG GAVHSFTDPN ANVPGKMQYD RRTSERAFRS MHNLLTEVFQ
R