| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3695 |
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| Symbol | |
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| ID | 5871488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4109533 |
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| End bp | 4110897 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641548818 |
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| Product | NADH dehydrogenase I subunit F |
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| Protein accession | YP_001669922 |
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| Protein GI | 167034691 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
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| TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.196409 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCA CTTCCTTCGG CCCGGCCAAC CGCATCGCGC GTTCGGCCGA AACTCATCCG
CTGACCTGGC GCCTGCGTGA CGATGGCGAG CCAGTATGGC TGGCCGAGTA CGAATCGAAA
AACGGCTACG CCGCAGCCCG CAAGGCGCTG GCGCAGATGT CGCAAGACGA TATCGTGCAA
GCGGTCAAGG ACTCCGGCCT CAAGGGCCGT GGTGGCGCAG GCTTCCCCAC GGGTGTGAAG
TGGGGCCTGA TGCCCAAAGA CGAATCCATG AACATCCGCT ACCTGCTGTG CAACGCGGAC
GAAATGGAGC CCAACACCTG GAAGGACCGC ATGCTGATGG AGCAACAGCC CCATCTGCTG
GTCGAGGGCA TGCTGATCAG CGCCCGCGCC CTGAAGGCCT ACCGTGGCTA CATCTTCCTG
CGTGGCGAAT ACACCACCGC AGCGAAAAAC CTCAACCGTG CCATCGATGA AGCCAAGGCC
GCAGGCCTCT TGGGCAAGAA CATCCTGGGC TCTGGTTTCG ATTTCGAGCT GTTCGTGCAC
ACCGGTGCCG GCCGCTACAT CTGCGGTGAA GAAACCGCGC TGATCAACTC GCTGGAAGGC
CGCCGCGCCA ACCCGCGTTC CAAGCCGCCC TTCCCTGCCG CCGTGGGCGT ATGGGGCAAG
CCGACGTGCG TGAACAACGT CGAAACCCTG TGCAACGTGC CGGCCATCGT CGCCAATGGC
AACGACTGGT ACAAGTCGCT GGCCCGTGAA GGCAGCGAAG ACCACGGTAC CAAGCTGATG
GGCTTCTCCG GCAAGGTGAA GAACCCAGGC CTGTGGGAAT TGCCATTCGG CGTCACCGCT
CGCGAGTTGT TCGAAGACTA CGCCGGCGGC ATGCGCGACG GCTTCAAGCT CAAGTGCTGG
CAGCCAGGCG GCGCCGGTAC TGGTTTCCTG CTGCCCGAGC ACCTCGACGC ACAAATGTAC
GCCGGCGGCA TCGCCAAGGT CGGCACCCGT ATGGGTACTG GCTTGGCCAT GGCGGTGGAC
GACAGCATCA ACATGGTTTC GCTGCTGCGC AACATGGAAG AGTTCTTCGC CCGTGAGTCG
TGCGGCTGGT GCACACCCTG CCGTGACGGC CTGCCGTGGA GCGTGAAGAT GCTGCGTGCG
CTGGAGAAAG GTCAGGGCCG CGCCGAAGAC ATCGAGACAC TGCTGGGGCT GGTCAACTTC
CTCGGCCCTG GCCGTACCTT CTGTGCTCAC GCACCAGGTG CCGTCGAGCC GCTGGGCAGT
GCCATCAAAT ACTTCCGGTC CGAGTTCGAA GCCGGTGTCG CGCCAGCCTC CGCTGGTGAC
ACCCTGCGCC CTAACCTGGC CAAGCCGATC GTGGTCGGCG CATAA
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| Protein sequence | MTITSFGPAN RIARSAETHP LTWRLRDDGE PVWLAEYESK NGYAAARKAL AQMSQDDIVQ
AVKDSGLKGR GGAGFPTGVK WGLMPKDESM NIRYLLCNAD EMEPNTWKDR MLMEQQPHLL
VEGMLISARA LKAYRGYIFL RGEYTTAAKN LNRAIDEAKA AGLLGKNILG SGFDFELFVH
TGAGRYICGE ETALINSLEG RRANPRSKPP FPAAVGVWGK PTCVNNVETL CNVPAIVANG
NDWYKSLARE GSEDHGTKLM GFSGKVKNPG LWELPFGVTA RELFEDYAGG MRDGFKLKCW
QPGGAGTGFL LPEHLDAQMY AGGIAKVGTR MGTGLAMAVD DSINMVSLLR NMEEFFARES
CGWCTPCRDG LPWSVKMLRA LEKGQGRAED IETLLGLVNF LGPGRTFCAH APGAVEPLGS
AIKYFRSEFE AGVAPASAGD TLRPNLAKPI VVGA
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