Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3677 |
Symbol | |
ID | 5871470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4090987 |
End bp | 4091682 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641548800 |
Product | glutathione S-transferase domain-containing protein |
Protein accession | YP_001669904 |
Protein GI | 167034673 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.145175 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00000417514 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACCGATC TCAGTGCTTT CCCCATTACC CGCAAGTGGC CCGCCAAACA CCCTGAACGC CTGCAGCTGT ACTCGCTGCC GACGCCCAAT GGCGTCAAGG TGTCGATCAT GCTCGAGGAA ATCGGCCTGG CCTATGAGCC GCACAAGGTC AGCTTCGATA ACGATGACCA GTTGAGTGCC GAGTTCATCT CACTCAGTGC CAACAACAAG ATCCCCGCCA TCCTCGACCC CAACGGGCCG GGCGGCCAGC CGCTGCCGCT GTTCGAGTCG GGGGCGATTC TGCAGTACCT GGCAGAGAAG AGCGGCCAGT TGCTCAGCCA GGACCCGGCC CAGCGTTACC AGACCCTGCA GTGGCTGATG TTCCAGATGG GCGGCATCGG GCCGATGTTT GGCCAGGTCG GTTTCTTTCA CTTCTTTGCT GGCAAGGAAT ATGAAGACAA GCGCCCGCGT GACCGCTATG TCAACGAGTC CAAGCGCCTG CTGGGTGTGC TGGATCGGCG CTTGAAAGGG CGGGAGTGGA TGGTTGACGA ATACAGCATC GCCGACATCG CCATTTTCCC GTGGGTGCGT AACCTGGTGG AACGTTACAA CGCCCGGGAG TTGGTCGGTT TTGATCAGTT CAAGGACGTG CAGCGGGTGC TGGCCGCGTT CCTCGAGCGG CCGGCGGTGC AGCGCGGCCT GAAAATCCCC GCCTGA
|
Protein sequence | MTDLSAFPIT RKWPAKHPER LQLYSLPTPN GVKVSIMLEE IGLAYEPHKV SFDNDDQLSA EFISLSANNK IPAILDPNGP GGQPLPLFES GAILQYLAEK SGQLLSQDPA QRYQTLQWLM FQMGGIGPMF GQVGFFHFFA GKEYEDKRPR DRYVNESKRL LGVLDRRLKG REWMVDEYSI ADIAIFPWVR NLVERYNARE LVGFDQFKDV QRVLAAFLER PAVQRGLKIP A
|
| |