Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3673 |
Symbol | |
ID | 5871466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4087894 |
End bp | 4088283 |
Gene Length | 390 bp |
Protein Length | 129 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641548796 |
Product | XRE family transcriptional regulator |
Protein accession | YP_001669900 |
Protein GI | 167034669 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.151534 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000000782403 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATGGAA TCGGTCCACG GCTGCGGGAA GAGCGTGAAC GGCTGGGCAT GACCCAGCGC GTATTTGGCG ATATCGGCGG GGTCGAGCCC AATGCCCAGG GTAAGTACGA AAGCGGTGAG CGCACGCCGC GGGTCGACTA CCTGGCGGCA CTGGCGGCCA GGGGTGTGGA CGCGCTGTAC GTGCTCAGCG GCCTGCGTAC CCCTGCACCG CTGCAAGGCT TGAGCACCGA CGAGTCGGGT TTGCTGGGGG CTTTTCGACA ATTATCGCTG GACGATCAGG CGGCGCTCTG GCATCTGTTG GGGCGGTTGG CCGACAACGC CAAGCCTAGG CAAACAGTGA GGCCGCTTAC CGTTGAACGT CAGGCTTTTC TGAAGGAAGT AATGCGCTAG
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Protein sequence | MNGIGPRLRE ERERLGMTQR VFGDIGGVEP NAQGKYESGE RTPRVDYLAA LAARGVDALY VLSGLRTPAP LQGLSTDESG LLGAFRQLSL DDQAALWHLL GRLADNAKPR QTVRPLTVER QAFLKEVMR
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