Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3669 |
Symbol | |
ID | 5871461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 4083218 |
End bp | 4084471 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641548791 |
Product | arsenical pump membrane protein |
Protein accession | YP_001669896 |
Protein GI | 167034665 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000000751712 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0000000000221941 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCCTGTCA GCGAAAACGC ATCGATCATC TGGGTCGTAG CCGCCCTCGC CACTTGCGGC GTCATCCTGC GCCCCTGGCG TATTCCGGAG TACGCCTGGG CCATGGGCGG CGCACTGCTG CTGACCGCTC TTGGCCTGAT CACGCCGCAC AGCGCGCTGG CTGCGGTGGC CGAAGGCAGC GACGTCTACC TGTTCCTGAT CGGCATGATG GTGCTGGCCG AGCTTGCTCG CCAAGAAGGC CTGTTCGACT GGCTGGCCCA CTATGCCGTC CAACACGCGC GAGGATCGGG GCAACGGCTG TTCGACCTGG TGTTCCTGGT GGGCACGCTG GTCACTGTTT TTTTGTCCAA CGATGCCACG GCCGTGGTGC TGACCCCGGC AGTCTACGCT GCGTGCAAGG CCGCCAAGGC CGAGCCTTTG CCGTACCTGT TCATCTGCGC CTTCATCGCC AACGCCGCCA GCTTCGTGCT GCCCATCTCG AACCCGGCCA ACCTCGTGGT ATTTGGCAGC CAGATGCCGC CGCTACTGGA CTGGTTAAGA CAGTTCAGCC TGCCATCACT GGCGGCAATT GCCCTGACCT ACGTGGCCCT GCGCCTGTCT CAGCGCCGAC AGATCCGCCA GCCGCTGGCC TTGAACGTTC AAACCCTGCC ACTGAGCGCG GGCGCACGGT TGTGCGCAGT GGGTATCGCC TTCACCGCGG TCTTGCTGCT GGGCGCCTCG GCGCTGGACC AGGCGCTGGG GCTGCCGACA TTCTGCGCGG GGGTAGCGAC CACCGCCCTG ATCCACCTGC GCCAGCGGCG CAGCCCGACG CCAGTGTTGC GCCATGTCGC GTGGGGCGTG CTGCCACTTG TAGCAGGCTT GTTCGTGCTG GTCGAAGCGG TCGCCCAAAC CGGCCTGGTG GTGCGTCTTG CCCATGCGCT GGCGGCGCTC GCCGAGGGCT CGCCGAACAC AGCCAGTTGG GTAGCGGGCA CAGGGGTTGC TATTGCCAGC AACCTGATGA ACAACCTGCC GACCGGGCTG ATTGCCGGGG CCATGGGGTC GGTCGTCGAG TTGCCGCAGC AAACTACCGC GGCTTTGCTG ATCGGCGTGG ACCTGGGCCC GAATCTGTCG ATTACCGGAT CGCTGGCCAC GCTGCTATGG TTGGTCGCGA TCCGCCGTGA AGGAGAGCAC GTGGGGGCCT GGCACTTTTT ACGCCTGGGG CTATTGGTGA TGCCCCCTGC CCTGGCTGCC GCGCTGCTGG CGTTGTGGGT GTAA
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Protein sequence | MPVSENASII WVVAALATCG VILRPWRIPE YAWAMGGALL LTALGLITPH SALAAVAEGS DVYLFLIGMM VLAELARQEG LFDWLAHYAV QHARGSGQRL FDLVFLVGTL VTVFLSNDAT AVVLTPAVYA ACKAAKAEPL PYLFICAFIA NAASFVLPIS NPANLVVFGS QMPPLLDWLR QFSLPSLAAI ALTYVALRLS QRRQIRQPLA LNVQTLPLSA GARLCAVGIA FTAVLLLGAS ALDQALGLPT FCAGVATTAL IHLRQRRSPT PVLRHVAWGV LPLVAGLFVL VEAVAQTGLV VRLAHALAAL AEGSPNTASW VAGTGVAIAS NLMNNLPTGL IAGAMGSVVE LPQQTTAALL IGVDLGPNLS ITGSLATLLW LVAIRREGEH VGAWHFLRLG LLVMPPALAA ALLALWV
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