Gene PputGB1_3658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3658 
Symbol 
ID5871450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4067686 
End bp4071006 
Gene Length3321 bp 
Protein Length1106 aa 
Translation table11 
GC content64% 
IMG OID641548780 
Producttrehalose synthase 
Protein accessionYP_001669885 
Protein GI167034654 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0366] Glycosidases
[COG3281] Uncharacterized protein, probably involved in trehalose biosynthesis 
TIGRFAM ID[TIGR02456] trehalose synthase
[TIGR02457] trehalose synthase-fused probable maltokinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.100309 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.000190821 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCAAGC GTGCCCGCAC GGCAGCCTTC ATCGACGACC CGCTGTGGTA CAAGGACGCC 
GTCATCTACC AGTTGCATAT CAAGTCGTTC TTCGATTCGA ACAATGATGG TATCGGCGAC
TTCGCCGGCC TGATCAGCAA ACTCGACTAC ATCGCCGAGC TGGGCGTCAA CACCCTGTGG
CTGCTGCCGT TCTACCCCTC GCCTCGGCGC GATGACGGCT ACGACATTGC CGATTACAAA
GCCGTGCACC CCGACTACGG CAGCCTGGGC GATGCCCGGC GTTTCATCGC CGAGGCACAT
AAGCGCGGCT TGCGGGTGAT CACCGAGCTG GTCATCAACC ACACCAGCGA CCAGCACCCG
TGGTTTCAGC GTGCCCGCCA TGCCAAACGC GGCAGCAAGG CGCGCGATTT CTACGTGTGG
TCGGACGACG ACCAGAAATA CGACGGCACG CGCATCATCT TCCTCGACAC CGAAAAGTCC
AACTGGACAT GGGACCCGGT CGCTGGCCAG TACTTCTGGC ACCGCTTCTA CGCGCACCAG
CCAGACCTCA ACTTCGACAA CCCGCAAGTA CTCAAGGCGG TGATCGGCGT GATGCGCTTC
TGGCTCGACC TGGGTGTCGA CGGCCTGCGC CTGGACGCCA TCCCGTACCT GATCGAACGC
GACGGCACCA ACAACGAGAA CCTCGCCGAA ACCCACGACG TGCTCAAGGC GATCCGCGCA
GAAATCGACG CCAACTACCC CGACCGCATG CTGCTGGCCG AAGCCAACCA GTGGCCGGAA
GACACGCGTC CATACTTCGG CGAAGGCGAG GGCGACGAAT GTCACATGGC CTTCCACTTT
CCGTTGATGC CACGCATGTA CATGGCCCTG GCCATGGAAG ACCGCTTCCC GATCACCGAC
ATCCTGCGCC AGACCCCGGA AATTCCCGCC AACTGCCAAT GGGCGATTTT CCTGCGCAAC
CACGATGAGC TGACCCTGGA AATGGTCACC GACCGCGAGC GCGACTACCT GTGGAACTAC
TACGCCGAAG ACCGCCGCGC GCGCATCAAC CTGGGTATCC GCCGGCGCCT GGCGCCGCTG
CTGCAGCGTG ACCGTCGGCG CATCGAGCTG CTCACCAGCC TGCTGCTGTC GATGCCCGGC
ACACCAACCC TGTATTACGG CGACGAACTG GGCATGGGCG ACAACATCTA CCTGGGTGAT
CGCGATGGCG TGCGTACGCC CATGCAGTGG TCGCCGGACC GCAACGGCGG GTTCTCCCGC
GCCGACCCGC AGCGCCTGGT GCTGCCGCCG ATCATGGACC CGCTGTACGG CTACCAGACC
GTCAATGTCG AAGCGCAAAG CCACGACCCG CATTCACTGC TGAACTGGAC CCGGCGCATG
CTGGCGGTGC GCAAGCAGCA GAAGGCCTTT GGCCGCGGCA GCCTGCGCAC GCTCACGCCC
AGCAACCGGC GCATTCTCGC CTACGTCCGC GAGTACACCG ATGTCGACGG CAACACCGAG
GTCATTCTGT GCGTGGCCAA CGTGTCGCGC GCTGCCCAGG CCGCAGAACT GGAATTGTCA
CACTTCGCCG ACAAAGTACC GGTGGAGATG CTCGGCGGCA GCGCCTTCCC GCCCATTGGC
CAGTTGCCGT TCCTGCTGAC CTTGCCACCC TATGCCTTCT ACTGGTTCCT GCTGGCCAGC
CGTGACCGCA TGCCCAGCTG GCATATCCAG CCCACCGAGG GGTTACCTGA ATTGACCACG
CTGGTACTGC GCAAGCGCAT GGAAGAACTA CTGGAAGCAC CTTCAAGCGA TACCCTGCAA
GCCACCATCC TGCCGCAATA CCTGCCCAAG CGGCGTTGGT TCGCCGGCAA GGAAGGGCCG
ATCGACGCCG TGCGCCTGTG TTACGGCGTG CGTTTTGGCA CTGCCACCAC ACCGGTGCTG
CTCAGTGAAA TCGAAGTGCG CAGCGACGGC ACGGCCACCC GCTACCAACT GCCGTTCGGC
CTGCTGCGCG AGGAGCAGAT CACTACCGCG CTGCCGCAGC AGTTGGCCTT GTCGCGGGTG
CGCCGCGCCC ACCAGGTTGG CTTGATCACA GATGCCTTCG TGCTGGAGCC GTTCATCCGC
GCCGTGATGC TTGCCTGCCA AGATGGCCTG CGCCTGCCAT GCGGCAACGA TGAGGGTGAA
TTGCGCTTCG AATGCACGGC GCAATTGGCC GGCCTGGCTC TCGACGAGGA AAGTGAAGTG
CGCTACCTCA GCGCCGAACA GTCCAACAGT TCGGTAGTGA TCGGCGACCG GGTGGTGCTC
AAGCTGATCC GCCGGGTCAA CCCAGGTGTT CATCCAGAGC TGGAAATGAG TGCCTACCTG
ACCGCCGCCG GCTTTGCCAA CATCTCGCCG CTGCTGGCCT GGGTCAGCCG AGTGGATGAG
CAGCAGGCAC CGCACCTGCT GATGATTGCC CAGGGTTACC TGAACAACCA GGGCGATGCC
TGGGGCTGGA CCCAGAACAC CCTTGAACGG GCCATTCGCG ACCAGATGGA GCCCACCACC
AGCGACCCCG AGGCGCACAC CGACGCACTG GCCGAGCTCA GTGGCTTCGC TGCCTTGCTT
GGCCAGCGCC TGGGCGAGAT GCACCTGTTG CTGGCCGCGC CAACCGAAGA CCCGGCCTTC
CAGCCACGTC CCAGCAATGC GCAGGACAGC CAGCGTTGGA GTACGCAGAT CAGCGCCGAG
CTGACCCACG CTCTCGACCT GCTGGCCCAA CACCGCGACA CGCTCGACCG CGATAGCCAG
GCCCTGGTCG ATGACCTGCA GCAGCAGCGC GACGGCCTGG CCCAGCACAT CGACAATCTG
ACCGACCAGG CCCAGGGCGG CCTGTTGATG CGGGTGCATG GCGACCTGCA CCTGGGCCAG
GTGCTGGTGG TGCAAGGTGA TGCCTACCTG ATCGATTTCG AAGGCGAGCC GGCCCGGTCG
CTGGAAGAGC GTCGGGCAAA ACACAGCCCG TACAAGGATG TCAGCGGCGT GCTGCGATCC
TTCGACTATG CTGCTGCGAT GATCTTGCGC AGCGCGTCTG CGGTGGACCT TTCAGACCCG
GCGCGGCAGG CCCGGCAACG GGTTGCCCGG CAGTACCTGC ACCAGTCGCG GCATGCCTTT
GTCGAAGCCT ATGGCCTGGC CACCGCCGCC ATGCCCCACG CCTGGCAGCG GGCCGAGGGC
GAGCGCGCGG CTCTGGAGCT GTTCTGCCTG GAAAAAGCCG CCTACGAGAT TACCTACGAA
GCCGAGAACC GTCCGAGTTG GCTGGCCGTG CCTTTGCATG GCCTGCATGG ATTGATCAGT
ACCTGGGGAG AGTCAGAATG A
 
Protein sequence
MAKRARTAAF IDDPLWYKDA VIYQLHIKSF FDSNNDGIGD FAGLISKLDY IAELGVNTLW 
LLPFYPSPRR DDGYDIADYK AVHPDYGSLG DARRFIAEAH KRGLRVITEL VINHTSDQHP
WFQRARHAKR GSKARDFYVW SDDDQKYDGT RIIFLDTEKS NWTWDPVAGQ YFWHRFYAHQ
PDLNFDNPQV LKAVIGVMRF WLDLGVDGLR LDAIPYLIER DGTNNENLAE THDVLKAIRA
EIDANYPDRM LLAEANQWPE DTRPYFGEGE GDECHMAFHF PLMPRMYMAL AMEDRFPITD
ILRQTPEIPA NCQWAIFLRN HDELTLEMVT DRERDYLWNY YAEDRRARIN LGIRRRLAPL
LQRDRRRIEL LTSLLLSMPG TPTLYYGDEL GMGDNIYLGD RDGVRTPMQW SPDRNGGFSR
ADPQRLVLPP IMDPLYGYQT VNVEAQSHDP HSLLNWTRRM LAVRKQQKAF GRGSLRTLTP
SNRRILAYVR EYTDVDGNTE VILCVANVSR AAQAAELELS HFADKVPVEM LGGSAFPPIG
QLPFLLTLPP YAFYWFLLAS RDRMPSWHIQ PTEGLPELTT LVLRKRMEEL LEAPSSDTLQ
ATILPQYLPK RRWFAGKEGP IDAVRLCYGV RFGTATTPVL LSEIEVRSDG TATRYQLPFG
LLREEQITTA LPQQLALSRV RRAHQVGLIT DAFVLEPFIR AVMLACQDGL RLPCGNDEGE
LRFECTAQLA GLALDEESEV RYLSAEQSNS SVVIGDRVVL KLIRRVNPGV HPELEMSAYL
TAAGFANISP LLAWVSRVDE QQAPHLLMIA QGYLNNQGDA WGWTQNTLER AIRDQMEPTT
SDPEAHTDAL AELSGFAALL GQRLGEMHLL LAAPTEDPAF QPRPSNAQDS QRWSTQISAE
LTHALDLLAQ HRDTLDRDSQ ALVDDLQQQR DGLAQHIDNL TDQAQGGLLM RVHGDLHLGQ
VLVVQGDAYL IDFEGEPARS LEERRAKHSP YKDVSGVLRS FDYAAAMILR SASAVDLSDP
ARQARQRVAR QYLHQSRHAF VEAYGLATAA MPHAWQRAEG ERAALELFCL EKAAYEITYE
AENRPSWLAV PLHGLHGLIS TWGESE