Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3634 |
Symbol | |
ID | 5871426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 4036235 |
End bp | 4037194 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641548756 |
Product | ribonuclease Z |
Protein accession | YP_001669861 |
Protein GI | 167034630 |
COG category | [R] General function prediction only |
COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
TIGRFAM ID | [TIGR02651] ribonuclease Z |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCTGC TGTTCCTCGG CACCTCCGCC GGGGTGCCGA CCAAGGCACG CAATGTCAGC GCCACGGCCG TGATCGAAAC CAACGGCAGC CACTGGTACC TGGTCGATTG CGGCGAAGGC ACCCAGCACC GGCTGTTGCA TACGCCACTG TCGATCCGCG ACCTGCGTGC AATCTTCATC ACCCACGTGC ATGGCGACCA TTGCTTCGGC CTGCCCGGCC TGCTGGCCAG CGCTGGCATG AGCGGGCGCA CCCAGCCGCT GGAGCTGATT TTGCCCGTCG CGCTGCACGA CTGGGTACGC CAGGGCCTGG TGGCCAGCGA CACGTTCCTG CCATTCGAAC TGCGCTTGTT GGCCGTGGAG GAACTGGCCG AATGGCGCAA CGAGGCCCTG CAGGTGACCA CCGTGCAACT GTCGCACCGG GTGCCCAGCG TGGGCTTCGT GTTCACTGAA CTCAACCCCG AACCCCGCCT GGACACCCAG CGGCTGCAAG CCGAAGGTAT CCCCCGTGGC CCGCTGTGGG GCGAACTGGC CAAAGGCCTG ACGGTGCAGC ACGACGGGCA GTTGCTGGAC GGTCACGACT ACCTGCGCCC GTCACGCCCG CCACGGCGGG TGATCGTGTG CGGGGACAAC GACAACCCCG AGCTGCTGGC CGACGTCGCC AAGGGTGCGG ACGTACTGGT GCATGAGGCC ACGTTCACCC AGGCGGTGGT CGAACGCACC GGGGTCACGT TCGGCCACAG CACCGCCGCT GCAGTGGCGC GCTTTGCCGA GGGCGCTGGT GTGCGCAACC TGGTACTGAC GCATTTCAGC GCCCGTTACC AAAGCGACCC AAGGCGTAGC CCCAACATCG ACAACGTGCG CGACGAGGCC CTCGCCCATT ACAGCGGGCA GCTGACCCTG GCGCAGGACC TGCAGCGCTA TCACCTTGGC CGTGATGGCT GTCTTGAGCC GGTCGGATGA
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Protein sequence | MDLLFLGTSA GVPTKARNVS ATAVIETNGS HWYLVDCGEG TQHRLLHTPL SIRDLRAIFI THVHGDHCFG LPGLLASAGM SGRTQPLELI LPVALHDWVR QGLVASDTFL PFELRLLAVE ELAEWRNEAL QVTTVQLSHR VPSVGFVFTE LNPEPRLDTQ RLQAEGIPRG PLWGELAKGL TVQHDGQLLD GHDYLRPSRP PRRVIVCGDN DNPELLADVA KGADVLVHEA TFTQAVVERT GVTFGHSTAA AVARFAEGAG VRNLVLTHFS ARYQSDPRRS PNIDNVRDEA LAHYSGQLTL AQDLQRYHLG RDGCLEPVG
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