| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3615 |
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| Symbol | |
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| ID | 5871407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4015767 |
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| End bp | 4016021 |
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| Gene Length | 255 bp |
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| Protein Length | 84 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641548737 |
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| Product | cold-shock DNA-binding domain-containing protein |
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| Protein accession | YP_001669842 |
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| Protein GI | 167034611 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | [TIGR02381] cold shock domain protein CspD |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.00635954 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAGCG GTAAAGTCAA GTGGTTCAAC AATGCCAAGG GCTATGGATT CATCAATGAG
GACGGCGGAA CCGAAGATCT GTTCGCACAC TATTCGGCGA TCCAGATGGA CGGTTACAAG
ACGCTGAAAG CCGGACAAGC TGTGACGTTC AACATCATCC AGGGCCCGAA AGGCCTGCAT
GCGGTTGAAA TCAAGGGCAT CAACGTCAGC GCTTCAACGG GAGTACCGAA CTCGCCCACG
ACCGCTAATG CGTGA
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| Protein sequence | MASGKVKWFN NAKGYGFINE DGGTEDLFAH YSAIQMDGYK TLKAGQAVTF NIIQGPKGLH
AVEIKGINVS ASTGVPNSPT TANA
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