| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3597 |
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| Symbol | |
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| ID | 5871389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3998037 |
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| End bp | 3999416 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641548719 |
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| Product | xanthine permease |
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| Protein accession | YP_001669824 |
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| Protein GI | 167034593 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG2233] Xanthine/uracil permeases |
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| TIGRFAM ID | [TIGR00801] uracil-xanthine permease
[TIGR03173] xanthine permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.243938 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTCAC ACGAACACAG CCCAGGCGCA GCGGCGCCTG CCAATGAACT GGTGCTTGGC
CTTGAGGACA AGCCACGGCT GTTGATCGGC CTGCTGGCAG CCCTGCAGCA CCTGCTGGCG
ATCATTGTGC CGATCGTTAC CCCTGGCCTG CTGATCTGCC AGGCGCTGGG CGTTTCGGCG
CGTGATACCA ACCTGATCGT TTCCATGTCG CTGGTGATCT CCGGTATTGC CACCTTCGTC
CAGTGCAAAC GCTTCGGCCC ATTTGGCGCC GGGCTGCTGA TCGTTCAGGG CACCAGCTTC
AATTTCGTAG GCCCGCTGAT TGCCGGCGGC GCGCTGATGG TCAAGCAAGG CACGCCCGTT
GAAGGGGTGA TGGCGGCCAT TTTTGGTGTG GTGATTGCGG GCTCGTTCGT CGAGATGGGG
GTGTCGCGCA TTCTGCCCTT CGTCAAACGC CTGATCACCC CGCTGGTGAC GGGCATCGTC
GTGCTGATGA TCGGCCTGAC CTTGATCAAG GTAGGCCTGA TAAGCATGGG TGGCGGCTTT
GGTGCCATGG CCAACGGTAC CTTCGCCAAT GGCGAAAACC TGCTGCTGTC GGGCGTGGTG
CTGGCGATTA TCGTGATCCT TAACCGCATT CCCGTGGTGT GGATGCGCAG TTGTGCCATC
GTCATCGCCC TGGCGGTCGG CTACGCGCTG GCCGGCTATA TGGGCCGCCT GGACTTCACT
GGCATGCACG AGGCCGCGCT GTTCCAGGTG CCGACGCCGC TGCACTTCGG CCTGAGCTTT
TCCTGGGCGC TGTTCATTCC GATGCTGGTG ATTTACCTGG TCACTTCGCT GGAAGCCATT
GGTGACGTGA CCGCCACCAG CAAGGTGTCG CGCCAGCCGG TCGAAGGGCC GGTATGGATG
CAGCGGATCA AGGGCGGTGT ACTGGTCAAC GGCGCCAACT CGCTGCTGGC CGGCTTGTTC
AACACCTTCC CTAGTTCGAT CTTTGCCCAG AACAACGGGG TAATTCAGCT GACCGGGATT
GCCAGCCGCC ATATCGGTAT GTGGATTGCC GTGATGCTGG TGCTGCTGGG GCTGTTCCCC
AGCGTTGCCG GGGTGATCCA GGCGGTGCCA GAGCCGGTGC TGGGTGGCGC GGCCATGGTG
ATGTTCGGGG CGGTTGCGGC TTCGGGCATC AACATTCTGG CCAGCACCCG GCTGGATCGT
CGCGCGCTGC TGATCATTGC CGTGTCGTTG GCACTGGGCC TGGGTGTGGC GCAGGTGCCG
GAGTTCCTGG CGCACATGCC GGCGGCGATT CGCAATGTGC TGGAGTCGGG TGTGGCCACC
GGGGGGATCT GTGCCCTGGT GCTGAACTGG TTCTTGCCGG AAAGCAAGGA ACAGGCGTAA
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| Protein sequence | MSSHEHSPGA AAPANELVLG LEDKPRLLIG LLAALQHLLA IIVPIVTPGL LICQALGVSA
RDTNLIVSMS LVISGIATFV QCKRFGPFGA GLLIVQGTSF NFVGPLIAGG ALMVKQGTPV
EGVMAAIFGV VIAGSFVEMG VSRILPFVKR LITPLVTGIV VLMIGLTLIK VGLISMGGGF
GAMANGTFAN GENLLLSGVV LAIIVILNRI PVVWMRSCAI VIALAVGYAL AGYMGRLDFT
GMHEAALFQV PTPLHFGLSF SWALFIPMLV IYLVTSLEAI GDVTATSKVS RQPVEGPVWM
QRIKGGVLVN GANSLLAGLF NTFPSSIFAQ NNGVIQLTGI ASRHIGMWIA VMLVLLGLFP
SVAGVIQAVP EPVLGGAAMV MFGAVAASGI NILASTRLDR RALLIIAVSL ALGLGVAQVP
EFLAHMPAAI RNVLESGVAT GGICALVLNW FLPESKEQA
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