| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3587 |
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| Symbol | |
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| ID | 5871378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3988110 |
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| End bp | 3989447 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641548708 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001669814 |
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| Protein GI | 167034583 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00895] benzoate transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.472801 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAATA TCAATGCAGC GGCCCTGCTG GAACGGGCCC GGTTCAATGC CTTTCACGCG
CGTTTACTGT TCTGGTGCGC GCTGATCATC ATCTTCGACG GCTATGACTT GGTCATCTAT
GGCGTGGTAC TGCCATCGCT GATGGCCGAA TGGGGCCTGA GCGCGGTACA GGCGGGGGTA
CTGGGCAGTT GCGCGCTGGT CGGGATGATG GCGGGGGCGC TGTTCTTCGG TTCGCTGTCG
GACCGGATCG GGCGGCGCAA AACCATCATG ACCTGTGTCT TGCTGTTCAG TGGCGTCACG
GCCTTGAATG GGCTGGCCAC TTCACCCGAA ACCTTCGCGC TGTGCCGCTT TGTTGCCGGG
CTGGGGATCG GCGGTGTCAT GCCCAATGTG GTTGCGCTGA TGAACGAGTA CGCACCCGGC
AAGATGCGCA GCACCTTGGT GGCGATCATG TTCAGTGGCT ATTCGCTGGG CGGCATGCTG
TCGGCTGGGC TGGGCATGCT GTTCATTCCC CAGTGGGGCT GGCAGGCGGT GTTCTATGTG
GCTGTGATAC CGCTGTTGCT GCTGCCGTTG CTGATCCATC AATTGCCCGA GTCCATGGAC
TTTCTGTTGC GCAGCGGTCA GGCCGAACGC GCCAAGGTTT TGCTGGCCCA GGCCACATCA
GACTATTTGC CGGAGCACGA TGACCAACTC AGCTTGGTCG CTACGCGGGC TGGGAAAGTG
TCGATTCGGG AGATTTTCAG TGAAGGGCGG GTGGTAAACA CGCTGACGTT GTGGGCGGCA
TTCTTCTGTT GCCTGTTGAT GGTTTATGCA TTGAGTTCGT GGCTGCCAAA GTTGATGAGC
AGTGCGGGCT ATGGGCTGAA CTCAAGCCTG GCATTTTTAC TGGTGCTCAA CTCGGGTGCG
ATCGTTGGGG CGATTGCGGG TGGCTGGCTG GGTGACCGTG TGGGTATCGC CAACGTGTTG
CTGTGCTTCT TCGCCTGCGG TGCGCTGTCG CTCAGCCTGC TTGCGCTAAA GGCGCCCGTG
GCGGTGCTGT ACCTGCTCAT CGCCGTGGCT GGCGCTTCTA CCATTGGCAC GCAGATTTTG
GCCAATGCCT GCGCGGTGCA GTACTACCCG CCACACATCC GTTCCACCGG ACTTGGGTGG
GCAATGGGTA TAGGGCGGCT GGGGGCAATC GTCGGGCCGG TACTGGGCGG GGTGCTGCAC
AGCGCGAACC TGCCTTATCA AAGCAGTTTC CTGGCGTTTG CCATACCGGG CGCCATTGGC
GCCGTCGCCA TTCTGCTGTT TATCCGGCGT CAGGTTGTGG CAACGCGAAG CCGGGGCGTT
CAGCGAGTTA TCGGCTGA
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| Protein sequence | MRNINAAALL ERARFNAFHA RLLFWCALII IFDGYDLVIY GVVLPSLMAE WGLSAVQAGV
LGSCALVGMM AGALFFGSLS DRIGRRKTIM TCVLLFSGVT ALNGLATSPE TFALCRFVAG
LGIGGVMPNV VALMNEYAPG KMRSTLVAIM FSGYSLGGML SAGLGMLFIP QWGWQAVFYV
AVIPLLLLPL LIHQLPESMD FLLRSGQAER AKVLLAQATS DYLPEHDDQL SLVATRAGKV
SIREIFSEGR VVNTLTLWAA FFCCLLMVYA LSSWLPKLMS SAGYGLNSSL AFLLVLNSGA
IVGAIAGGWL GDRVGIANVL LCFFACGALS LSLLALKAPV AVLYLLIAVA GASTIGTQIL
ANACAVQYYP PHIRSTGLGW AMGIGRLGAI VGPVLGGVLH SANLPYQSSF LAFAIPGAIG
AVAILLFIRR QVVATRSRGV QRVIG
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