| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3574 |
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| Symbol | |
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| ID | 5871365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3972498 |
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| End bp | 3973790 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641548695 |
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| Product | outer membrane porin |
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| Protein accession | YP_001669801 |
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| Protein GI | 167034570 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.135647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.538607 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGGTT TCACTGCACC GCGTTTTTCT TCGTCTGCGC GTCTTGCCGG CGGTTGTATT
GCCGCAGCGT TGTGTGCCGA GGCTTCGGCA GAAGAGGCCG GTTTCATCGA AGGTGCCCGC
GCCACACTGC AAGCGCGCAA TTACTTTTTC AGCCGCGATT ATGCCGATAT CAAGGGCGCG
AGCACCCAGT CGCGTACTCA GGAATGGGCA CAGGGCTTTA TCCTCAATGC CAGCTCCGGT
TACACCCAGG GCACCGTTGG CGTCGGTGTG GATGTTACTG GCCTGCTTGG CTTCAAGCTC
GACAGCAGCC CGGCGCATGC CAAGTCCGGT TTGCTGCCCA GCCTGGACAG CGGCAAGTCG
GCGGACGAAT ACAGCCGTTT GGGGGCGGCG ATCAAGTTCA AGGTGTCGCA GACCGAGCTG
AAGGTGGGCG AGTTGATGCC CAACCTGCCT GTGCTGTTGT TCAGCGACTT GCGCCTGCTG
CCGCCGACCT ATCAGGGCGC GATGCTGGAA TCGCGCGAGA TAGCGGGGTT GACCCTGAAT
GCTGGCCAGT TCCGCTCCAC CAGCCTGCGC GACTCGTCCA ACAGCCAGAA GATGTACGCA
CTGGTCAACG ACCCGATCAA CCCGGCGCGG TTGGCGCGTT TTACCAGCGA CCGCTTCAAC
TACGTGGGCG CCGACTATGC CTTCAACGAC AACCGCACCA GCGTGGGGGT GTGGCAGGCG
CAGTTGGAGG ATATCTACCA GCAGCGCTTC TACAGCTTCA AGCACGCCGA GCCGCTGGGG
GACTGGACGC TTGGGGTCAA TGCCGGCTAT TTCGATGCCC GCGAGGACGG GCGCAAGATT
GCCGGCGATT ACGACAACCA TGCGTTGTTC AGCCTGTTCT CGGCCAAGAC CGGTGGGCAT
ACCTTTTACC TGGGTTACCA GCAGATCGGC GGCGATGATG GTTTCATCCA GGTGGGTGCC
AACACCAACC CGATGGGCAA TACGCTGCCG ACCTATGAGT TCTCGGCGCC GGGTGAACGC
TCGTGGCAGG TGAGGCATGA CTACAATTTT GTCGCTTTAG GCGTTCCGGG CCTGACGTCG
ACCCTGCGCT ATGTGAAGGG GCGGGACGTG GACACCGGGC TGGGCTTCGA GGGGCGTGAC
CGCGAGCGCG ATCTGGACCT GGCCTATGTG GTGCAAAGCG GGCCGCTGGC TGGGCTGGGG
ATACGCGTGC GCAATGTGAT GGCGCGCTCC AATTACCGCA CCGATATCGA TGAGAACCGC
TTGATCCTCA GTTACACGGT CAAGCTGTTC TGA
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| Protein sequence | MQGFTAPRFS SSARLAGGCI AAALCAEASA EEAGFIEGAR ATLQARNYFF SRDYADIKGA
STQSRTQEWA QGFILNASSG YTQGTVGVGV DVTGLLGFKL DSSPAHAKSG LLPSLDSGKS
ADEYSRLGAA IKFKVSQTEL KVGELMPNLP VLLFSDLRLL PPTYQGAMLE SREIAGLTLN
AGQFRSTSLR DSSNSQKMYA LVNDPINPAR LARFTSDRFN YVGADYAFND NRTSVGVWQA
QLEDIYQQRF YSFKHAEPLG DWTLGVNAGY FDAREDGRKI AGDYDNHALF SLFSAKTGGH
TFYLGYQQIG GDDGFIQVGA NTNPMGNTLP TYEFSAPGER SWQVRHDYNF VALGVPGLTS
TLRYVKGRDV DTGLGFEGRD RERDLDLAYV VQSGPLAGLG IRVRNVMARS NYRTDIDENR
LILSYTVKLF
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