Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3531 |
Symbol | |
ID | 5871320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3935551 |
End bp | 3936198 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641548650 |
Product | hypothetical protein |
Protein accession | YP_001669758 |
Protein GI | 167034527 |
COG category | [S] Function unknown |
COG ID | [COG3132] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0125316 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.0563858 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGAAC ACGAAACCGC AGGTGAAGGC CGCTTCAACA GCATCGAGAT CCGCGTTCTC GGCTCGCTGA TCGAAAAGCA GGCCACCAGC CCGGAAAGCT ACCCGCTGAC CCTCAATGCC CTGGTCCTGG CCTGCAACCA GAAGACCAGC CGCGAACCTG TGATGAACCT CACCCAAGGC CAGGTTGGCC AAGCCCTGCG TGCGCTTGAA GGGCAGGACC TGACCCGCTT GCAGATGGGC AGCCGTGCCG ACCGCTGGGA ACAGCGGGTA GACAAGGCAC TGGAGCTGGT GCCCGCACAG CTGGTACTGA TGGGCCTGAT GTTCCTGCGC GGCCCGCAAA CGCTCAACGA ACTGCTGACC CGCAGCAACC GCCTGCACGA CTTCGACGAC ACCGAGCAGA TTCAGCATCA GCTGGAGCGC CTGATCTCGC GGGACCTGGC CTTGCACCTA CCGCGTCAGG CCGGCCAGCG TGAGGACCGC TACACCCACG CCTTGGGCGA CCCGGCGGAA ATCGAGGCGA TCCTCGCTGC ACGCCAGCAG GAAGGTGGCG CACGCAGCAG TGGCGCCAGT GTGTCGGAAG AACGCATCGA AGCCCTCGAA GCACGCATTG CAGCGCTGGA AGCACGGCTG GCCGAGCTGG AAGGCTGA
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Protein sequence | MSEHETAGEG RFNSIEIRVL GSLIEKQATS PESYPLTLNA LVLACNQKTS REPVMNLTQG QVGQALRALE GQDLTRLQMG SRADRWEQRV DKALELVPAQ LVLMGLMFLR GPQTLNELLT RSNRLHDFDD TEQIQHQLER LISRDLALHL PRQAGQREDR YTHALGDPAE IEAILAARQQ EGGARSSGAS VSEERIEALE ARIAALEARL AELEG
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