Gene PputGB1_3531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3531 
Symbol 
ID5871320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3935551 
End bp3936198 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content65% 
IMG OID641548650 
Producthypothetical protein 
Protein accessionYP_001669758 
Protein GI167034527 
COG category[S] Function unknown 
COG ID[COG3132] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0125316 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0563858 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAAC ACGAAACCGC AGGTGAAGGC CGCTTCAACA GCATCGAGAT CCGCGTTCTC 
GGCTCGCTGA TCGAAAAGCA GGCCACCAGC CCGGAAAGCT ACCCGCTGAC CCTCAATGCC
CTGGTCCTGG CCTGCAACCA GAAGACCAGC CGCGAACCTG TGATGAACCT CACCCAAGGC
CAGGTTGGCC AAGCCCTGCG TGCGCTTGAA GGGCAGGACC TGACCCGCTT GCAGATGGGC
AGCCGTGCCG ACCGCTGGGA ACAGCGGGTA GACAAGGCAC TGGAGCTGGT GCCCGCACAG
CTGGTACTGA TGGGCCTGAT GTTCCTGCGC GGCCCGCAAA CGCTCAACGA ACTGCTGACC
CGCAGCAACC GCCTGCACGA CTTCGACGAC ACCGAGCAGA TTCAGCATCA GCTGGAGCGC
CTGATCTCGC GGGACCTGGC CTTGCACCTA CCGCGTCAGG CCGGCCAGCG TGAGGACCGC
TACACCCACG CCTTGGGCGA CCCGGCGGAA ATCGAGGCGA TCCTCGCTGC ACGCCAGCAG
GAAGGTGGCG CACGCAGCAG TGGCGCCAGT GTGTCGGAAG AACGCATCGA AGCCCTCGAA
GCACGCATTG CAGCGCTGGA AGCACGGCTG GCCGAGCTGG AAGGCTGA
 
Protein sequence
MSEHETAGEG RFNSIEIRVL GSLIEKQATS PESYPLTLNA LVLACNQKTS REPVMNLTQG 
QVGQALRALE GQDLTRLQMG SRADRWEQRV DKALELVPAQ LVLMGLMFLR GPQTLNELLT
RSNRLHDFDD TEQIQHQLER LISRDLALHL PRQAGQREDR YTHALGDPAE IEAILAARQQ
EGGARSSGAS VSEERIEALE ARIAALEARL AELEG