| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3488 |
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| Symbol | |
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| ID | 5871275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3892058 |
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| End bp | 3892966 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641548605 |
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| Product | ribokinase |
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| Protein accession | YP_001669715 |
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| Protein GI | 167034484 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0524] Sugar kinases, ribokinase family |
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| TIGRFAM ID | [TIGR02152] ribokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.232463 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.188896 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCCA AGGTTGTGGT GGTCGGCAGC CTCAATATGG ACCTGGTGGC CCGCGCGCAG
CGCCTGCCCA GGGCCGGCGA AACACTCCCC GGCGAAAGCT TTTTCACCGT GCCGGGCGGC
AAGGGCGCTA ATCAGGCCGT GGCAGTGGCA CGGTTGGGCG GTAGCGTGGC GATGATCGGC
AATGTGGGGG ACGACGATTA TGGTCGGCAA CTGCACCGGG CATTGTACGT CGAGGGTATC
GACTGCCAGG GCGTAAGCAC GTGCCCAGGG GTTTCCAGTG GTGTCGCACT GATCACCGTG
GATGCCGCCA GCCAGAACTG TATCGTTATC ATTCCCGGCG CCAACGGCCT GCTTACGCCA
CGGTCGGTGC AGCGTTTCGA TGCGCTGTTG CAGGCGGCTG AAGTGATCAT TTGCCAACTG
GAAGTGCCGG CCGAAACCGT GGCCTGGACC CTGGCCAGAG GGCATGAGCT GGGTAAGCAG
GTAATCCTGA ACCCAGCACC TGCTACCGGT CCCTTGCCGG CGGACTGGTT TGCGCATATC
GATTACCTCA CCCCTAACGA AAGCGAGGCC GAAGCGTTGA CCGGCATGGC GGTGACCGAC
CAGGAAAGCG CCCGGCGCGC TGGCGAGCGG CTGCTGCAAC TGGGGGCGGG GAAAGTGATC
ATCACCCTGG GTGCGCAAGG GGCCTTGCGG ATTACTGCTC AAGGCCACCA GCACTATCCG
GCGTCGGTGG TGCAACCGTT GGATACCACC GCTGCCGGCG ATACCTTTGT CGGTGGCTTT
GCGGCCGGGC TGGTGCGGGG GTTGGAGGAG GGCGAGGCTA TTGTGTTTGG CCAGCGTGCC
GCCGCATTGT CGGTCACCCG TGCCGGTGCC CAGCCGTCGA TTCCTTACCT GGCGGAGCTG
ACACCATGA
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| Protein sequence | MNAKVVVVGS LNMDLVARAQ RLPRAGETLP GESFFTVPGG KGANQAVAVA RLGGSVAMIG
NVGDDDYGRQ LHRALYVEGI DCQGVSTCPG VSSGVALITV DAASQNCIVI IPGANGLLTP
RSVQRFDALL QAAEVIICQL EVPAETVAWT LARGHELGKQ VILNPAPATG PLPADWFAHI
DYLTPNESEA EALTGMAVTD QESARRAGER LLQLGAGKVI ITLGAQGALR ITAQGHQHYP
ASVVQPLDTT AAGDTFVGGF AAGLVRGLEE GEAIVFGQRA AALSVTRAGA QPSIPYLAEL
TP
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