| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3481 |
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| Symbol | thrS |
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| ID | 5871268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3886761 |
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| End bp | 3888683 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641548598 |
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| Product | threonyl-tRNA synthetase |
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| Protein accession | YP_001669708 |
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| Protein GI | 167034477 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0441] Threonyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.800828 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0249513 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGTTA TTACTCTTCC CGATGGCAGT CAACGTTCGT TTGATCACGC CGTATCCGTA
GCCGACGTAG CCGCTTCCAT CGGCGCGGGC CTTGCCAAGG CCACCGTGGC CGGCAAGGTC
GACGGCAAAC TGGTCGATGC TTGCGACCTG ATCAGCAACG ACGCCACCCT GCAGATCATT
ACCCCTAAAG ATGAAGAGGG ACTGGAGATC ATCCGTCACT CGTGCGCCCA CTTGGTTGGC
CACGCCGTGA AGCAGCTGTA CCCGACCGCC AAGATGGTGA TCGGCCCGGT GATCGACGAA
GGCTTCTATT ACGACATCGC CTACGAGCGC CCCTTCACCC CTGAAGACAT GGCCGCTATC
GAAAAGCGCA TGATGGAGCT GATCGAGAAA GACTACGACG TGGTCAAGAA GATGACCCCG
CGTGCCGAAG TGATCGATGT GTTCAAGGCC CGTGGCGAAG ACTACAAGCT GCGCCTGGTC
GAAGACATGC CGGATGAGCA GGCCATGGGC CTGTACTACC ACGAAGAATA CGTCGACATG
TGCCGTGGCC CGCACGTGCC GAACACTCGC TTCCTCAAGG CATTCAAGCT GACCAAGCTG
TCCGGCGCGT ACTGGCGCGG CGATGCCAAG AACGAGCAGC TGCAGCGCGT GTATGGCACC
GCCTGGGCTG ACAAGAAGCA GTTGGCCGCT TACATCCAGC GCATCGAAGA AGCCGAAAAG
CGCGACCACC GCAAGATCGG CAAGCAGCTC GACCTGTTCC ACCTGCAGGA AGAGGCCCCA
GGCATGGTGT TCTGGCACGC CAACGGCTGG ACCGTCTACC AGGTACTCGA GCAGTACATG
CGTGGCGTGC AGCGTGAAAA CGGCTACCAG GAAATCAAGA CCCCGCAAGT TGTCGACCGT
ATCCTCTGGG AGCGCTCCGG CCACTGGTCC AACTACGCCG AGAACATGTT CACCACGTCG
TCGGAAAGCC GTGACTACGC GGTAAAACCG ATGAACTGCC CGTGCCACGT GCAGGTGTTC
AACCAGGGCC TGAAAAGCTA CCGTGACCTG CCGCTGCGCC TGGCCGAGTT CGGTGCCTGC
CACCGTAACG AGCCGTCTGG CGCCCTGCAC GGCATCATGC GCGTGCGTGG CTTCGTACAG
GACGACGCGC ACATCTTCTG CACCGAAGAG CAGGTGAAGA AAGAAGCTGC CGACTTCATC
AAGCTGACCC TGGACGTGTA CAAGGACTTC GGCTTCAGCG ACATCGCCAT GAAGCTGTCC
ACCCGTCCGG CCAAGCGTGT AGGTTCTGAA GAGTTGTGGG ACCGTGCCGA AACGGCGCTG
GCCGACGCCC TGAACGAATC GGGCCTTGAG TGGGAATACC AGCCAGGCGA GGGCGCCTTC
TACGGCCCGA AAATCGAGTT CACCCTGCGC GACTGCCTCG GCCGTAACTG GCAGTGCGGT
ACCCTGCAGT ACGACCCGAA CCTGCCAGAA CGCCTGGATG CTAGCTATAT CGCCGAAGAT
AACAGCCGTG TTCGCCCGGT CATGCTGCAC CGCGCCATTC TCGGTTCGTT CGAACGCTTC
ATCGGCATGC TGATCGAACA CTACGCTGGC GTATTCCCGG CGTGGCTGGC CCCGACCCAG
GCGGTGATCA TGAATATCAC CGACAAGCAG GCCGATTTCG CCCTCGAGGT AGAGAAATCT
CTGAACGGTA GCGGTTTCCG TGCCAAGTCG GACTTGAGAA ATGAGAAGAT CGGCTTTAAA
ATCCGCGAGC ATACTTTGCT CAAGGTCCCG TACCTTTTGG TTATAGGGGA CCGCGAAGTC
GAAACGCAAA CCGTCGCTGT GCGTACTCGC GAAGGCGCAG ACCTGGGCTC CATGCCCGTC
GCCCAATTCG CTGAGTTGCT GACACAAGCG GTTTCCCGGC GTGGTCGCCA AGAATCGGAG
TAA
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| Protein sequence | MPVITLPDGS QRSFDHAVSV ADVAASIGAG LAKATVAGKV DGKLVDACDL ISNDATLQII
TPKDEEGLEI IRHSCAHLVG HAVKQLYPTA KMVIGPVIDE GFYYDIAYER PFTPEDMAAI
EKRMMELIEK DYDVVKKMTP RAEVIDVFKA RGEDYKLRLV EDMPDEQAMG LYYHEEYVDM
CRGPHVPNTR FLKAFKLTKL SGAYWRGDAK NEQLQRVYGT AWADKKQLAA YIQRIEEAEK
RDHRKIGKQL DLFHLQEEAP GMVFWHANGW TVYQVLEQYM RGVQRENGYQ EIKTPQVVDR
ILWERSGHWS NYAENMFTTS SESRDYAVKP MNCPCHVQVF NQGLKSYRDL PLRLAEFGAC
HRNEPSGALH GIMRVRGFVQ DDAHIFCTEE QVKKEAADFI KLTLDVYKDF GFSDIAMKLS
TRPAKRVGSE ELWDRAETAL ADALNESGLE WEYQPGEGAF YGPKIEFTLR DCLGRNWQCG
TLQYDPNLPE RLDASYIAED NSRVRPVMLH RAILGSFERF IGMLIEHYAG VFPAWLAPTQ
AVIMNITDKQ ADFALEVEKS LNGSGFRAKS DLRNEKIGFK IREHTLLKVP YLLVIGDREV
ETQTVAVRTR EGADLGSMPV AQFAELLTQA VSRRGRQESE
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