| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3478 |
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| Symbol | rplT |
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| ID | 5871265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3885571 |
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| End bp | 3885927 |
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| Gene Length | 357 bp |
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| Protein Length | 118 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641548595 |
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| Product | 50S ribosomal protein L20 |
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| Protein accession | YP_001669705 |
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| Protein GI | 167034474 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0292] Ribosomal protein L20 |
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| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.0800064 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.00881726 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCTCGTG TTAAGCGCGG CGTTATCGCT CGTAAGCGTC ACAAAAAAAT TCTGAAACTG
GCTAAAGGTT ACTACGGTGC ACGTTCGCGC GTATTCCGTG TAGCCAAGCA AGCGGTCATC
AAGGCAGGCC AATACGCCTA CCGCGACCGT CGCCAGAAGA AGCGTCAGTT CCGCGCACTG
TGGATCGCTC GTATCAACGC CGGTGCCCGC ACCAACGGTC TGTCCTACAG CCGTCTGATT
GCTGGCCTGA AAAAGGCTTC GATCGAAATC GACCGTAAGG TTCTGGCTGA TCTGGCAGTG
AACGAAAAAG CGGCGTTTGC TGCGATTGTC GAGAAAGCTA AAGCCGTTCT GGCTTAA
|
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| Protein sequence | MARVKRGVIA RKRHKKILKL AKGYYGARSR VFRVAKQAVI KAGQYAYRDR RQKKRQFRAL
WIARINAGAR TNGLSYSRLI AGLKKASIEI DRKVLADLAV NEKAAFAAIV EKAKAVLA
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