| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3417 |
|---|
| Symbol | |
|---|
| ID | 5871202 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 3847681 |
|---|
| End bp | 3848724 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641548532 |
|---|
| Product | SPP1 family phage head morphogenesis protein |
|---|
| Protein accession | YP_001669644 |
|---|
| Protein GI | 167034413 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01641] phage putative head morphogenesis protein, SPP1 gp7 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 1.53739e-16 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGTG ACGGCTACCT GTCCGACGCA GCGACTCGCC ACCAGGTGCA CGTCCAGCGC
TACGCCGGCG GCAGCCTCAA GCGCCTGGCC AAGTTCATCA TCAAGGCCAT CAGCACCGCC
AAATCGCGCG TATCAGAGGG ATTGAGCCGT TACGGCACCC AACGGTACGA GAAGCAGATT
TCGGAGCTAC AGGGCGAGCT GGCAGGCGTA TACGGCGAGA TGAAGCAGCA GGCCGTGCTC
GACCTCACTG AGTTCGCCGG CTACGAGGCC GAGTTCAACA TGACGCTGCT GGGCAAGGTC
GTGAAGACGG TCGTCCAGCT GAATGCTCCA AGTATCGAGC AGGTAGCCGC TGCTGCCCTG
GCTGATCCTC TCGACCTAGA GGTCGGCAAA AGTCGGCAGC GCATCAGCAT TGCAGGCGCA
CTGGACCAGT ACGGCACCAA GAAGAGCGCC GAAATCATCA GCGAGATTCG CATGGGGTCG
GCATTAGGTG AGACATCCGG GCAGATCAGC CGGCGGCTCA CATCGCTGGG CGTCCAGCAG
CGTGATCAGG CGCAGGCATT GGTCAACACC ATGACCAACC ACATCGCCAC AACGGCGCGC
GTGGAGGTGC TCAAGGACAA CGACGACATT CTCAAGGGGA TGCGCCGCAT CGCTACCCTG
GACAGTCGAA CCACGCTGTT CTGTATGAGC ATCGACCAGA CCATCATCCC GCTGGATGGG
CCGAAGCCGC CGTATCACTG GCGATGCCGG ACAACGGTCA TCCCGGTTCT GAAAGACGAG
TTCGCCCGGG AGATAGCTGG ATCAACCCGG CCTTCAGTCG GTCCGGACGG CGCCGAGCAG
GTCAGCAGCA AGACCAGCTA TGGCGAGTGG CTTGCTCGGC AGCCTGCGGC ATTCCAAAAG
GATGTGCTGG GTCCGTCACG CTATGAACTG TTCAGCAAGG GTGAGCTTAC GATCGATCGA
TTCGTCGATC ATGACGGCAA GACATTAACG TTAAAACAGC TCCGCGATCG CGAGCCGATG
GCGTTCAACC GGGCCGAGAT GTAG
|
|---|
| Protein sequence | MSSDGYLSDA ATRHQVHVQR YAGGSLKRLA KFIIKAISTA KSRVSEGLSR YGTQRYEKQI
SELQGELAGV YGEMKQQAVL DLTEFAGYEA EFNMTLLGKV VKTVVQLNAP SIEQVAAAAL
ADPLDLEVGK SRQRISIAGA LDQYGTKKSA EIISEIRMGS ALGETSGQIS RRLTSLGVQQ
RDQAQALVNT MTNHIATTAR VEVLKDNDDI LKGMRRIATL DSRTTLFCMS IDQTIIPLDG
PKPPYHWRCR TTVIPVLKDE FAREIAGSTR PSVGPDGAEQ VSSKTSYGEW LARQPAAFQK
DVLGPSRYEL FSKGELTIDR FVDHDGKTLT LKQLRDREPM AFNRAEM
|
|---|
| |