Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3416 |
Symbol | |
ID | 5871201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 3846533 |
End bp | 3847252 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641548531 |
Product | hypothetical protein |
Protein accession | YP_001669643 |
Protein GI | 167034412 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.877857 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 1.14702e-16 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGACCTTGA AATTCCAACT GGACAGCCTC GAAGGCGTCG AAGAATCGGT AGCAGCCCTG TACGTCGAGA AGGACGGCAA GTTCGTCCTC GGCATCGATG GACTGCCGCA GCAGGAGGAC GTCACCGGCC TGAAGGCCAA GGTGGAAGAG CTCCTGGGCG AGAAGAAGGC GGCGGAGAAG GCCCGTCGTG AAGCCGAAGA CAAGGCGCGC TCCGAGGCCG AGGAGGCCGC TCGCAAGGCT GGCGATGTCG AAGGCCTGGA GAAGTCCTGG TCTGAAAAGT ACGCCCGCCG CGAGGCCGAA CTGATGGGCC AGCTCGAAAG CACCAACAGC ACCCTGCTGG GCCAGATCCG GGATCTGACC GTGGGGCGCA CCGCGACCGA GATCGCGACC ACCCTGGCTG TCCCAGGCAG CGCCAAGGCA TTGCTTCCCC ACATCGAACG CCGGCTGAGC GTCGAGCAAC GCGACGGTAA ACCCACCGTT GTCGTGTTGG ACGCCGCCGG CAAGCTCTCC GCAGCAACTC TGGATGAGCT GAAAGCAGAA TTCACCAACG ATCCGGCCTT CGGTCCGCTG ATCGCTGGCA GCAAGGCATC TGGCGGCGGG GCCGGCGGAC ACCAAAAGGG CGGCGGGGCC GCGCAGAAAC GCTCCGAAAT GACCTCCGTC CAGAAGCGCG AATACATCGA AGCGCATGGG CAGGAGGCAT ACCTCAAATT GCCAAAATAG
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Protein sequence | MTLKFQLDSL EGVEESVAAL YVEKDGKFVL GIDGLPQQED VTGLKAKVEE LLGEKKAAEK ARREAEDKAR SEAEEAARKA GDVEGLEKSW SEKYARREAE LMGQLESTNS TLLGQIRDLT VGRTATEIAT TLAVPGSAKA LLPHIERRLS VEQRDGKPTV VVLDAAGKLS AATLDELKAE FTNDPAFGPL IAGSKASGGG AGGHQKGGGA AQKRSEMTSV QKREYIEAHG QEAYLKLPK
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