Gene PputGB1_3416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3416 
Symbol 
ID5871201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3846533 
End bp3847252 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content63% 
IMG OID641548531 
Producthypothetical protein 
Protein accessionYP_001669643 
Protein GI167034412 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.877857 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.14702e-16 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGACCTTGA AATTCCAACT GGACAGCCTC GAAGGCGTCG AAGAATCGGT AGCAGCCCTG 
TACGTCGAGA AGGACGGCAA GTTCGTCCTC GGCATCGATG GACTGCCGCA GCAGGAGGAC
GTCACCGGCC TGAAGGCCAA GGTGGAAGAG CTCCTGGGCG AGAAGAAGGC GGCGGAGAAG
GCCCGTCGTG AAGCCGAAGA CAAGGCGCGC TCCGAGGCCG AGGAGGCCGC TCGCAAGGCT
GGCGATGTCG AAGGCCTGGA GAAGTCCTGG TCTGAAAAGT ACGCCCGCCG CGAGGCCGAA
CTGATGGGCC AGCTCGAAAG CACCAACAGC ACCCTGCTGG GCCAGATCCG GGATCTGACC
GTGGGGCGCA CCGCGACCGA GATCGCGACC ACCCTGGCTG TCCCAGGCAG CGCCAAGGCA
TTGCTTCCCC ACATCGAACG CCGGCTGAGC GTCGAGCAAC GCGACGGTAA ACCCACCGTT
GTCGTGTTGG ACGCCGCCGG CAAGCTCTCC GCAGCAACTC TGGATGAGCT GAAAGCAGAA
TTCACCAACG ATCCGGCCTT CGGTCCGCTG ATCGCTGGCA GCAAGGCATC TGGCGGCGGG
GCCGGCGGAC ACCAAAAGGG CGGCGGGGCC GCGCAGAAAC GCTCCGAAAT GACCTCCGTC
CAGAAGCGCG AATACATCGA AGCGCATGGG CAGGAGGCAT ACCTCAAATT GCCAAAATAG
 
Protein sequence
MTLKFQLDSL EGVEESVAAL YVEKDGKFVL GIDGLPQQED VTGLKAKVEE LLGEKKAAEK 
ARREAEDKAR SEAEEAARKA GDVEGLEKSW SEKYARREAE LMGQLESTNS TLLGQIRDLT
VGRTATEIAT TLAVPGSAKA LLPHIERRLS VEQRDGKPTV VVLDAAGKLS AATLDELKAE
FTNDPAFGPL IAGSKASGGG AGGHQKGGGA AQKRSEMTSV QKREYIEAHG QEAYLKLPK