| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3411 |
|---|
| Symbol | |
|---|
| ID | 5871196 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 3843441 |
|---|
| End bp | 3844115 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641548526 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001669638 |
|---|
| Protein GI | 167034407 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 1.18281e-16 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGCG GCTCTCATAT GGCCCAGCGA TATGGAGGGC TTGAAGGCAG TTTTGCCGAC
AGCATTCGGG CATTCACGGA GCAGGCCCAG CAAGCGCTGG ACTCCACCTT CAGGGCAATT
GTGATCGAGA TCGGTAGTAG CGTCATTCTT ATGTCGCCGG TGGGCAACCC AGAACTATGG
GCGGCCAACT TGGCCCACCA GGCCAAAGCC AACCAGGCCG CAGATGACTA CGATTTTAAG
GTCGCTGTCC GCAACACCCT GATCAACCTG AACCAGGACA ACTTCACCAA GGCCGGCAAG
CTGCGCAAGG GCGTGAAGTA CGCCAAGCCT CTGACCAAGA CCGAGCGCAT GCAGAATTTC
GCTACCAATG GCCTTGTCGC TGGCCAGGGC TACGTCGGCG GCCGGTTCCG GGGTAACTGG
CAGTTCTCCA TCGATTCACC GGCAACCGGC GAATTGGATG TCGTCGATCG GTCAGGCAAC
GAGACCATCG CCCAACTGAA GGCGCAAGTC GCTGCGCTGA CCATCGGCCA GACGGCGTAC
ATCGTGAACA ACCTGCCCTA CGCCATCCCA TTGGAATACG GCCACTCAAC TCAGGCGCCT
AAGGGCATGG TCCGGGTCAC GCTGGATCGC TTCCAGGGCA TCGTCGAAGA AGCGATAAGG
AACAACAAGG TATGA
|
|---|
| Protein sequence | MARGSHMAQR YGGLEGSFAD SIRAFTEQAQ QALDSTFRAI VIEIGSSVIL MSPVGNPELW
AANLAHQAKA NQAADDYDFK VAVRNTLINL NQDNFTKAGK LRKGVKYAKP LTKTERMQNF
ATNGLVAGQG YVGGRFRGNW QFSIDSPATG ELDVVDRSGN ETIAQLKAQV AALTIGQTAY
IVNNLPYAIP LEYGHSTQAP KGMVRVTLDR FQGIVEEAIR NNKV
|
|---|
| |