Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3403 |
Symbol | |
ID | 5871188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3838925 |
End bp | 3839500 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641548518 |
Product | hypothetical protein |
Protein accession | YP_001669630 |
Protein GI | 167034399 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.00811897 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 1.34849e-16 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGAGTTTA ACGAAGACAT CTATTACAAG CTCATAGGCC GAGCAGACCT CAAAACAGAA CTAAACACAC TCATGCATAA CACTAAGGAC GATGTGCTCG TAGTCCTACG CATCCATTTA ATGTGTGAAA ATCTCCTAGA AGCCTGGATA TGCGCCGCCA CCCATAGACT TGATTTTTTC AACCACCCAC AAGAACTTCG ATTAACATTT AACAACAAAT TAGGAATAGC TTACAACTTA GAGCTCCCCA AGGCCGCGTA TGATTTCCTG CATCAAATAA ACAAAACGAG AAACGAGTTC GCACACAAAC TTAACAAGAA AACGATTACA GTTGGTCTTT CATCGAAACT GGAGCGAATC ATAGCAAAGC TTGTACCTCT CTCCCCCCCA AAAATGCAGA TCATGGATGG AGATATGGAA GTGGACAGCT TACAAAGCGA GTCTACCCCA GAGCGACTGA AACTCTGTAT GATCTTCTTT TTATTTCAGC TTTACTTAAC CTTGAGTAGA TTACCGGAAA CTGATGACAA TAATGTCACC GAACGAAAAA CCGCTACCAT CAGCTTCACG CTTTAG
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Protein sequence | MEFNEDIYYK LIGRADLKTE LNTLMHNTKD DVLVVLRIHL MCENLLEAWI CAATHRLDFF NHPQELRLTF NNKLGIAYNL ELPKAAYDFL HQINKTRNEF AHKLNKKTIT VGLSSKLERI IAKLVPLSPP KMQIMDGDME VDSLQSESTP ERLKLCMIFF LFQLYLTLSR LPETDDNNVT ERKTATISFT L
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