Gene PputGB1_3400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3400 
Symbol 
ID5871185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3837134 
End bp3837988 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content58% 
IMG OID641548515 
Productprophage antirepressor 
Protein accessionYP_001669627 
Protein GI167034396 
COG category[K] Transcription 
COG ID[COG3617] Prophage antirepressor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000183753 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.97476e-16 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAGCGATA ATAGCACAGC TGCATCCAGT GTCACCCCGT TTGACTTCCG TGGGTATAGC 
GTTCGTGCAG TCACTATCGA TGGCGAACCA TGGTTCGTCG CGGCCGACGT ATGCCGCGTG
CTGGGGGTGA CGAACACCAC CCAGGCTATG CAGGCCCTGG ATGAAGATGA GCGGTCTATG
TTCAACATAG GTCGTCAGGG CAGCGCCAAC CTGGTCAATG AGTCCGGCCT CTACACCCTG
ATCCTGCGTA GCCGCGACGC GGTGAAAAAA GGTAGCAAGC CTCACGCTTT CCGGAAATGG
GTGACCGCCG AGGTTTTGCC ATCGATCCGG AAGACTGGCG CTTATGTCGA TCAGCACAAC
GCGATGGGCG ATTTGGTCGG TGCAGTTATC GGCAGCAGCG GTGAGGTTGT GCTGGACCGG
GTGATTGACC AGAAGGCCAT GTCCATCCCG AGCAGCCTTC GCCGGAGCTA CCGGCACACC
ATGAAAAGCA GGTTGCGCAG CCGGTTTAAT GTGCAGCGCA CCGCCCTCAT ACCTGCTGAA
TGCCTGTCGG ACGCCTGCAA CTTCGTCGCG GCCTACGTCT TTGAGGGTGA TCTGTTGCCT
AAGCGCGAAC AGGTCCAAAT CGTTGGTGGC CCACAAAAGC GCTACCTGGT CTCGTTCGAT
CACAAGGGTG AGCAACACGT CGAAGAGGTT GCTGACGATG CTTGCGTGCT GTCGACACGC
GATCTGATCA AGGGAATGGT CATGTCGCCA GGTGATATCC CGGTCTCTAC CCCGGACATG
TTCGAGTTTC TGATGGCGGC AGTTGTGAAC CTTCGTGGCC GATTCGAGTA CATGGCGCGG
AGGGCTGTGA AATGA
 
Protein sequence
MSDNSTAASS VTPFDFRGYS VRAVTIDGEP WFVAADVCRV LGVTNTTQAM QALDEDERSM 
FNIGRQGSAN LVNESGLYTL ILRSRDAVKK GSKPHAFRKW VTAEVLPSIR KTGAYVDQHN
AMGDLVGAVI GSSGEVVLDR VIDQKAMSIP SSLRRSYRHT MKSRLRSRFN VQRTALIPAE
CLSDACNFVA AYVFEGDLLP KREQVQIVGG PQKRYLVSFD HKGEQHVEEV ADDACVLSTR
DLIKGMVMSP GDIPVSTPDM FEFLMAAVVN LRGRFEYMAR RAVK