| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3368 |
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| Symbol | |
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| ID | 5871153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3803821 |
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| End bp | 3805137 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641548484 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001669596 |
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| Protein GI | 167034365 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.422025 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAAT CCCTAGCCGC GTTCAAACGC TGGCGCATCC AGATTTTCGC TATCACCTGG
CTGGCCTACG CCGCCTTCTA CTTCACCCGC AAAGCCTTCT CGGTGGCCAA GCTGGGCATC
GCCGAAGACC CAAGCTTCAT GCTCGACAAG GCCGCCATGG CCAACCTCGA CGCCATCTAC
CTGGCCGCCT ATGCCGTAGG CCAGTTCACC TGGGGCATGC TTGCCGACCG CTTCGGCCCA
CGCGTGGTGG TACTCGGTGG GTTGCTGATT TCTGCGGCGG CGGCGGTGGT GATGGGCAGT
TACGCCACCT TCCCGATCTT CGCCACCTGC ATGCTGGTGC AGGGCCTGGC GCAGTCCACC
GGTTGGGCAG GGTTATGCAA GAACATCGGC AGCTTCTTCC CGGCCTCGCA GCGCGGGCGG
GTGCTGGGGC TGTGGAGTTC CTGCTATGCC TTCGGCGGCC TGGTGGCCTC GCCATTCGCC
GGCTGGTGGG CCTATACCCT GGTCGGCACC TGGCATGCGG CGTTCTTCTC CAGCGCAGCC
GTGGTGGCGC TGGTGGCGGT GCTGTTCTTC TTCTTGCAGC GCAACAAACC TGAAGACGTC
GGCCTGCCGG CGGTGGAGCC CGAGCCGCAG AGCATGGCCC CCGCTGACAA CCTGTGCAGT
GTGTGGGCGC CACTGAGGGA GATCATGCGC AACCGCACGG TGTTGACCCT GGGCCTGGCG
TACTTCCTGC TCAAGCCTGC GCGCTACGCC ATCCTGCTGT GGGGCCCGGT GATCGTCTTC
GAGCAGATGC CCTCGGTGGG CAAGGTGGGC GCGGCAATCA TCCCGACCGC CTTCGAGCTG
GCCGGGCTGC TTGGCCCGAT CATGATCGGC CTGGCCTCCG ACAAACTGTT CGGCGCCCGG
CGCATGCCGG CCTGCGTGAT CAGCCTGGTG CTGCTGACCG TGACCCTGGC GGCGTTCATG
GCGGCCATGC ACACCGGCAG TGTGATCCTG GTGGTGGCTT TGCTGTTTGT CATGGGCCTG
ACCCTGTACG GGCCGGACTC GATGATCAGC GGCGCGGCGG CCATCGACTT CGGCACCGCC
AAGGCCGGCG CCACCGCGGC CGGCTTCGTC AATGGCTGCG GTTCGGTGGG GGCGGTGTTG
GGCGGGCTGC TGCCGGGTTA CTTCGACGGC GTCACGGTGT TCATCGTGTT CGCCGGCTGT
GCACTGTTCT CCGCGCTGGT GTTGCTGCCG CATTGGAACA GCCGCCCAGC CTCCAGCGCG
CAAAGCAATG ACGTGGCACC GAACACCAGC ATGGCAATCA AGCCACTGCG TACCTAA
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| Protein sequence | MNQSLAAFKR WRIQIFAITW LAYAAFYFTR KAFSVAKLGI AEDPSFMLDK AAMANLDAIY
LAAYAVGQFT WGMLADRFGP RVVVLGGLLI SAAAAVVMGS YATFPIFATC MLVQGLAQST
GWAGLCKNIG SFFPASQRGR VLGLWSSCYA FGGLVASPFA GWWAYTLVGT WHAAFFSSAA
VVALVAVLFF FLQRNKPEDV GLPAVEPEPQ SMAPADNLCS VWAPLREIMR NRTVLTLGLA
YFLLKPARYA ILLWGPVIVF EQMPSVGKVG AAIIPTAFEL AGLLGPIMIG LASDKLFGAR
RMPACVISLV LLTVTLAAFM AAMHTGSVIL VVALLFVMGL TLYGPDSMIS GAAAIDFGTA
KAGATAAGFV NGCGSVGAVL GGLLPGYFDG VTVFIVFAGC ALFSALVLLP HWNSRPASSA
QSNDVAPNTS MAIKPLRT
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