| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3338 |
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| Symbol | |
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| ID | 5871123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3752678 |
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| End bp | 3754252 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641548454 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001669566 |
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| Protein GI | 167034335 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.165624 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGC TGTTTTCGCG CCGGGTGTTT CTCGGCAACA GCCTGGCTGT TGGTGGCAGC
CTGCTGCTTG GCGGCGGGTT GCTCAGCGGC TGCGACAGCG GCGCGCCAGC AACCGCCAGC
GCGGTGCCGA CGGGCACGCC GGTGCGTGGC GGGCGACTGC GGGTGGGCAT TATCGACGGT
GACCAGGCCG GTAACCTCGA TGCGCACAAA CCGGTGGGTG GCGGCATCAT CCGTGGCTGG
GCGTTGTACG CCAAGTGCTG GGAATGGAAT GCCGATGTCA GCACGCGCCT GGCACTGGCC
GAGTTCGCCG AGCCGAACGC CGATGCCAGT GCCTGGACCA TCCGGCTGAA GCCTGGGCTG
GAATTTCACC ACGGCAAAAG TATCACCGCC GATGACATGC TGTTCTCGAT CCTGCGCCTG
ACCGACCCGC AACTGGCCTC GCCATTTGCC GGGCTGGTCG GCGCCATCGA TCGGCAGGCC
TTGCGCAAGC TGGACGCGCG CACCCTCGAA ATTCGCTTCA AGCAGGGGCA AAGCTTCTAC
CCCCTGGACG AAACCTTGAT CAGCTTCGGC GGCATCGTGC CCACTGACTA CCACCCGGTG
ACCAACCCGG TCGGTGCCGG CCCGTACCGG CTGAAAAGCT TCATCCCCGG CCAGCGCTCG
CTCTACACCC GCTTCGAAAA CTACTACAAG CCCAACCGTC CCTATGCGGA TGAGCTGGAA
ATCATCGAAT TCAAGGACCA GGTCTCGCGG GCCGCAGCGC TGCGTGCCGG GCAGATCGAC
GTGGCCAGTG GTGTGCAGGC CGAGCACAGT GCGTTGCTCA AGGCCGACCC ACGGCTGCGG
CTGTATGCCT CGCCGACCAC CTCGTTCACC GGCTTCAACC TGAACATGGC CAAGGCGCCG
TTTCAGGATG TGCGGGTGCG CCAGGCGTTC CGCCTGCTGG CCGACCGCCA GGAGCTGGTG
GCGCGTGGCC TGAATGGTTT TGGGCGGGTG GCCAATGACC TGTATTCGCC CCATGACCCC
ACCTTCAACC ATGCCATCGC CCAGCGCCCC TACGACCTGG ACCAGGCCCG TTCGCTGCTG
CGTCAGGCCG GGCAGAGCGA TTTGCGTGTC GAACTGACAA CCACGCCGGG GGCCGGTGTC
AACGCCGCGC TGGTGTTCGC TCAGCAGGCT TTGAAAGCCG GGGTGCAGGT GAAGGTCAAT
CAGGTGGATG GGTCCGTCTT CAATGGCCCG CAGCGTGAGC AATGGCAGCT GTCGCCGGGC
TCGACTCCGG CGCGCGGCTT TCTCGCCTCG GCGTTGCACA ACGATGCACC GCAGGCCATC
TACAACCGCA GCAATTTCCA CGACCCGCGC TTTACCGACC TGTTCCAGCA AGCCCTGGCC
CAGCCTGACT TGGCATTGCG CAAGGCCTTG GTGCATGAAG CCCAAACCAT CCAGCACGAA
CGTGGTGGGT TGCTGGTCTG GGGCTTTTCC GACGTGCTCG ATGCCGCGTC GGCCAAGGTG
GGCGGGCTCA CCCCGGAACA GACCACCTTC GCCTCCTGGC GTTTTGACGA ACTCTGGTTG
AACCCCAATG CCTGA
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| Protein sequence | MSELFSRRVF LGNSLAVGGS LLLGGGLLSG CDSGAPATAS AVPTGTPVRG GRLRVGIIDG
DQAGNLDAHK PVGGGIIRGW ALYAKCWEWN ADVSTRLALA EFAEPNADAS AWTIRLKPGL
EFHHGKSITA DDMLFSILRL TDPQLASPFA GLVGAIDRQA LRKLDARTLE IRFKQGQSFY
PLDETLISFG GIVPTDYHPV TNPVGAGPYR LKSFIPGQRS LYTRFENYYK PNRPYADELE
IIEFKDQVSR AAALRAGQID VASGVQAEHS ALLKADPRLR LYASPTTSFT GFNLNMAKAP
FQDVRVRQAF RLLADRQELV ARGLNGFGRV ANDLYSPHDP TFNHAIAQRP YDLDQARSLL
RQAGQSDLRV ELTTTPGAGV NAALVFAQQA LKAGVQVKVN QVDGSVFNGP QREQWQLSPG
STPARGFLAS ALHNDAPQAI YNRSNFHDPR FTDLFQQALA QPDLALRKAL VHEAQTIQHE
RGGLLVWGFS DVLDAASAKV GGLTPEQTTF ASWRFDELWL NPNA
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