| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3332 |
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| Symbol | |
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| ID | 5871117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3743402 |
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| End bp | 3744955 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641548448 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001669560 |
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| Protein GI | 167034329 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGGG ACGGTTACCC ACTGAGCCGG CGCAGTTTCC TTGGCCACGC CGGCGTGCTG
GCCGGCGGGT TGCTGGCCGG CTGCGGCCCC GCCGACGGCC CAATCCATGG CGTGGCCGAC
CAGCCACGCC ATGGCGGGCG CCTGCGCCTG GGCATCATCG ACGGCAACCA GAGCGGCAAC
CTCGACGCCC ACAAGCCCAT CGGCAGCGGC ATCGTGCGTG GCTTTGCCCT GTACAGCAAG
CTGTGGGAAT GGGACGAGCA GATGCAGCCG CGCCTGGCCC TGGCCGAGTT CGCCGAGCCC
AATGCCGATG CCAGCAGCTG GACCTTGCGC CTGAAGCCGG GGCTGGAGTT CCACCACGGC
AAGACCATCG ACGCCGACGA CCTGATCTTC TCCATCCGCC GCCTCACCGA CCCGCAGCTG
GCCTCGCCCT ACGCGGCGCT GCTGCACTGG GTGGACCGCG ACAACCTGGT CAAGCTGGAC
GACCGTACCG TGCGCCTGGG CTTTCGCGAA GGGCGCAGCT ACCTGCCGCT GCCGGAGACC
TGGGTCAACT TCGGCGGCAT CGTGCCGGTG GACTACCACC CAGTCACCAA CCCGGTCGGC
GCCGGGCCTT ACAAACTGAA AAGCTTCACC CCAGGTCAGC GCTCACTGTT CACCCGCTTC
GACAACTACT ACAAACCCGG CAAGCCTTAT GCCGATGAAC TGGAGATCAT CGACTTCAAG
GACCAGACCG GCCGCCTGGC GGCATTGCGG GCCGGGCAGA TCGACATGGC CAACGTCATG
TCCACCGAAC ACCTGCAGGT GCTGCAAGCC GACCCACGGC TGCGCCTGCT GAAGTCGGTG
AGCGGCAACT GGCTGTCGTT CGACATGAAC ACCGCCAAGG CGCCGTTCGA CGACCCGCGC
GTGCGCGAGG CATTCCGCCT GCTGGCCGAC CGTGACGAGC TGGTGCGCCG TGCGCTCAAT
GGCCAAGGCC GGGTGGCCAA CGACCTGTAT GCACCGTTCG ACCCCACCTT CGACCACAGC
ATCGGCCCAC GCCCTCATGA CCCGCAGCGC GCAGCCCAGT TGCTGCGCGA AGCCGGCCAT
GAACAGTTGC AGGTGGAGTT GGTGACCACG CCAGGGCCGG GGCTGGCTTC GGCCCTGGTG
CTGGCCGAGC AGGCCCGGCG TATCGGTGTG ACCCTCAATG TGCGCCAGGT CGACCTGGCC
ACCTTCCAAG GGCCGCAGCG CGATGACTGG ACCTTGAGTA CCGGTGGCAG CATCGGTGCG
CCGTTCCTGG CCAGCGCGAT TCACACCGAT GCGCCATTCG CCGTGGCCAA CAAGACCCAC
TTCAACGACC CCGAATTCAG TCAGGCCTTT CTCGCCGCCA TGGCCCAGCC AGACCTGGAG
AAGCGCAAGA ACCTGGTGCA CCAGGCGCAA CGCATTCAAT ACGAACGCGG CGGCATGTTG
ATCTGGGGCT TTGCCGACCT GCTCGACAGT GTCAGCACCC GCGTGGGTGG CGCGCAGGCA
GAGCAGTCGC TGTTCAGTAC CTGGCGGTTC GAGAGCCTGT GGCTGAAAAC CTGA
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| Protein sequence | MARDGYPLSR RSFLGHAGVL AGGLLAGCGP ADGPIHGVAD QPRHGGRLRL GIIDGNQSGN
LDAHKPIGSG IVRGFALYSK LWEWDEQMQP RLALAEFAEP NADASSWTLR LKPGLEFHHG
KTIDADDLIF SIRRLTDPQL ASPYAALLHW VDRDNLVKLD DRTVRLGFRE GRSYLPLPET
WVNFGGIVPV DYHPVTNPVG AGPYKLKSFT PGQRSLFTRF DNYYKPGKPY ADELEIIDFK
DQTGRLAALR AGQIDMANVM STEHLQVLQA DPRLRLLKSV SGNWLSFDMN TAKAPFDDPR
VREAFRLLAD RDELVRRALN GQGRVANDLY APFDPTFDHS IGPRPHDPQR AAQLLREAGH
EQLQVELVTT PGPGLASALV LAEQARRIGV TLNVRQVDLA TFQGPQRDDW TLSTGGSIGA
PFLASAIHTD APFAVANKTH FNDPEFSQAF LAAMAQPDLE KRKNLVHQAQ RIQYERGGML
IWGFADLLDS VSTRVGGAQA EQSLFSTWRF ESLWLKT
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