Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3287 |
Symbol | |
ID | 5871072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 3687590 |
End bp | 3688126 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641548403 |
Product | hypothetical protein |
Protein accession | YP_001669515 |
Protein GI | 167034284 |
COG category | [S] Function unknown |
COG ID | [COG3009] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.762664 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACGAC TACGCAATGT TTGTGTGGCT AGCCTGCTGG TATGGCTCGG GGGCTGCAGC AGTACGCCGA ACAACTACCA CACCTTGGTA CCGAGTGAGC CGGCGCGTGA CAGTGGCCAG CGCATCCAGG TGGTCAGGGT GGTCGTCCCG CCCCAGGTCG ACCGCCCACA GTTGGTGGTA CGCGAAGGGC AGAGCGGCCT GGCCATCCTT GAGACGGAAT GGTGGGGGGC CAACCTGGTG GATGAGTTCC GCAGCGCCCT GCAAGACCAG TTGGGTGGCC CGGCGGGCGG CGGCAAGGCG GCTTTGCGGG TGGATGTGCA GCGCTTCGAC ACCGTGCCGG GGCGTTACGC CTCGCTGGAG GCCGTTTGGC GCCTGAAGGT GGCGGGGCAG GCTGAGCTGA CCTGCCGCAC CTCGGTGCAG ACTGCGGCTG ACAACAGCAT CACCAGCCTG GTGAATGCGC ATCAGGCCAA CCTTCGCAAA CTGGCCGAGG CGGTGCGGGG GAGTGCCGGG CGGGGTAGTT GTTCGCCTGT GGCCTGA
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Protein sequence | MQRLRNVCVA SLLVWLGGCS STPNNYHTLV PSEPARDSGQ RIQVVRVVVP PQVDRPQLVV REGQSGLAIL ETEWWGANLV DEFRSALQDQ LGGPAGGGKA ALRVDVQRFD TVPGRYASLE AVWRLKVAGQ AELTCRTSVQ TAADNSITSL VNAHQANLRK LAEAVRGSAG RGSCSPVA
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