Gene PputGB1_3287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3287 
Symbol 
ID5871072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3687590 
End bp3688126 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content67% 
IMG OID641548403 
Producthypothetical protein 
Protein accessionYP_001669515 
Protein GI167034284 
COG category[S] Function unknown 
COG ID[COG3009] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.762664 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGAC TACGCAATGT TTGTGTGGCT AGCCTGCTGG TATGGCTCGG GGGCTGCAGC 
AGTACGCCGA ACAACTACCA CACCTTGGTA CCGAGTGAGC CGGCGCGTGA CAGTGGCCAG
CGCATCCAGG TGGTCAGGGT GGTCGTCCCG CCCCAGGTCG ACCGCCCACA GTTGGTGGTA
CGCGAAGGGC AGAGCGGCCT GGCCATCCTT GAGACGGAAT GGTGGGGGGC CAACCTGGTG
GATGAGTTCC GCAGCGCCCT GCAAGACCAG TTGGGTGGCC CGGCGGGCGG CGGCAAGGCG
GCTTTGCGGG TGGATGTGCA GCGCTTCGAC ACCGTGCCGG GGCGTTACGC CTCGCTGGAG
GCCGTTTGGC GCCTGAAGGT GGCGGGGCAG GCTGAGCTGA CCTGCCGCAC CTCGGTGCAG
ACTGCGGCTG ACAACAGCAT CACCAGCCTG GTGAATGCGC ATCAGGCCAA CCTTCGCAAA
CTGGCCGAGG CGGTGCGGGG GAGTGCCGGG CGGGGTAGTT GTTCGCCTGT GGCCTGA
 
Protein sequence
MQRLRNVCVA SLLVWLGGCS STPNNYHTLV PSEPARDSGQ RIQVVRVVVP PQVDRPQLVV 
REGQSGLAIL ETEWWGANLV DEFRSALQDQ LGGPAGGGKA ALRVDVQRFD TVPGRYASLE
AVWRLKVAGQ AELTCRTSVQ TAADNSITSL VNAHQANLRK LAEAVRGSAG RGSCSPVA