Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3283 |
Symbol | |
ID | 5871068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3682153 |
End bp | 3683931 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641548399 |
Product | hypothetical protein |
Protein accession | YP_001669511 |
Protein GI | 167034280 |
COG category | [R] General function prediction only |
COG ID | [COG2194] Predicted membrane-associated, metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.972392 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCACACA CTACATCCCC CGCCGCGCAC AAGCGCGTGG ACTGGGCCGG CCTGGGCTGG CTTCTGCTGT TCTTCTGGTA CTTCTCCGGC GTCACCCAGG CGTTGTTGCT GTTCAGTGGC ACCACCGGCT TTGCCGGTTT TCGCGATGCG TTCTTCCTCA GCAGCCTGTG GCTGGCCCCG GTGCTGCTGC TGCCCCGCTT CACCCGCGCC ACGGCGGCTG TCATCGGCCT GGTATTGTGG GCCGCATCGC TGGTGGGCCT GAGTTACTTC GGCATCTATC GTCAGGAGTT CTCGCAAAGC GTCATCTTCG TGATGTTCGA GTCCAACACC GCCGAGGCCG GCGAATACTT CAGCCAGTAC TTCAGCGTGT GGCTGGGCCT GGCGCTGCTG CTGTACACGC TGGTTGCAGT ACTGCTGTGG AAACGTGTAC GCCCCGTCAG CTTGCCCCTA CGCAGCCGCC TGCCGGTGGT GGCCCTGTTG CTGGTGGCCA ACCTGGTGTA CCCGTTCTAC AAGCAGATGG TCACCCAGGA ACGCAACTTC GCCGATGCCG CTGAAAAAGT GCAGCAACGC ATGGAGCCCG CAGTGCCTTG GCAACTGTTG GTCGGCTACC GTCAGTATCG CCAGCAACTG GACAACATGC AGGACTTGCT GGCCCAGAAC GCCGCATTGC CCCCACTGCA AAACCTGCGT GACAGCAGCG GCACCGCGCC GCGCACCCTG GTGCTGGTAC TGGGCGAGTC CACCACCCGC GAGCACATGC ACCTGTACGG CTACAACCGC GACACCACGC CCAACCTCGA CGCGCTGGCC GCCAGCGACA AGGGCCTGAC GGTGTTCCGC GACGTGGTAT CGCCACGCCC GTACACCATC GAAGTGATGC AGCAGATCCT CACCTTCGGC GACGAGCAGA ACCCGGACCG CTTCCTCACC GACCCGTCGC TGATCAACCT GATGAAACAG GCAGGCTACA AGACCTTCTG GATCACCAAC CAGCAGACCA TGACCAAGCG CAACACCATG CTCACCACCT TCTCGCAGCA GACCGATGCG CCGGTATACC TGAACAACCA GCGCAACCAG AATGCCAGCC AGTACGATGA TGTGGTGCTG GCGCCGTTCG AGAAGGCCTT GCAAGACCCT GCGCCGAACA AGTTCATCAT CGTGCACCTG CTGGGCACGC ACATGGACTA TCGCTTCCGC TATCCCGACG ACTATGCCCA CTTTACCGAC AACACAGGTG TACCCGGCCA GCTGACGGCG GACCAGGTAA AAACCTACAA CTTCTACGAC AACGCGGTGC GCTACAACGA CTATGTGGTG TCGAGCCTGA TTAAACGCTA CTCGGCCGGC AACCCCAATG GCTTCCTGGT GTACCTGTCC GACCACGGTG AAGATGTGTA CAGCTCCGGT GACCACGACC GCCTGGGGCG CAACGAAGGC GCGCCGACCC GGCCGATGTA CACCATCCCG TTCCTGCTAT GGACCTCGCC CAGCTGGCAG GCCGAGCACC CACGCGACTT GCAGGCGATG GCCAGCCGCC CTTACAGCAG CTCGCACCTG ATCCATACCC TGTCCGACCT GGCCGGGCTG AGCTATGACC GCTATGAGCC GGCCAAGAGC CTGGTGAGCC CGCAGTTCGT GGCAGCACCG CGCTGGATCG GTGACCCGTA CCGCAAGGAT GGCTTGCGCG AATTCGACCA CCTGCCGATG GACAAGGCTG CAGGCTTGCA GCAGGCGGCC AGTAATGGCG AAGAGCAGAA CGGCAAGCGC TTGAACTGA
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Protein sequence | MSHTTSPAAH KRVDWAGLGW LLLFFWYFSG VTQALLLFSG TTGFAGFRDA FFLSSLWLAP VLLLPRFTRA TAAVIGLVLW AASLVGLSYF GIYRQEFSQS VIFVMFESNT AEAGEYFSQY FSVWLGLALL LYTLVAVLLW KRVRPVSLPL RSRLPVVALL LVANLVYPFY KQMVTQERNF ADAAEKVQQR MEPAVPWQLL VGYRQYRQQL DNMQDLLAQN AALPPLQNLR DSSGTAPRTL VLVLGESTTR EHMHLYGYNR DTTPNLDALA ASDKGLTVFR DVVSPRPYTI EVMQQILTFG DEQNPDRFLT DPSLINLMKQ AGYKTFWITN QQTMTKRNTM LTTFSQQTDA PVYLNNQRNQ NASQYDDVVL APFEKALQDP APNKFIIVHL LGTHMDYRFR YPDDYAHFTD NTGVPGQLTA DQVKTYNFYD NAVRYNDYVV SSLIKRYSAG NPNGFLVYLS DHGEDVYSSG DHDRLGRNEG APTRPMYTIP FLLWTSPSWQ AEHPRDLQAM ASRPYSSSHL IHTLSDLAGL SYDRYEPAKS LVSPQFVAAP RWIGDPYRKD GLREFDHLPM DKAAGLQQAA SNGEEQNGKR LN
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